RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
TRAPPC9-201ENST00000389328 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
TRAPPC9-201ENST00000389328 MGAQ8IWI9 3026 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 FRYLO94915 3013 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 M0QXV9 152 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 WFDC9Q8NEX5 89 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 WFDC11Q8NEX6 87 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
TRAPPC9-201ENST00000389328 SERP2Q8N6R1 65 aa9.52□□□□□ -0.88
TRAPPC9-201ENST00000389328 CITED2Q99967 270 aaPredicted RBP9.52□□□□□ -0.88
TRAPPC9-201ENST00000389328 FRYQ5TBA9 3013 aa9.52□□□□□ -0.89
TRAPPC9-201ENST00000389328 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
TRAPPC9-201ENST00000389328 CDC42SE2Q9NRR3 84 aa9.52□□□□□ -0.89
TRAPPC9-201ENST00000389328 CCL18P55774 89 aa9.51□□□□□ -0.89
TRAPPC9-201ENST00000389328 Q9UF83 564 aa9.51□□□□□ -0.89
TRAPPC9-201ENST00000389328 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
TRAPPC9-201ENST00000389328 CXCL5P42830 114 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 SPAG11BQ08648 103 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 SVIPQ8NHG7 77 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 ACANP16112 2415 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
TRAPPC9-201ENST00000389328 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
TRAPPC9-201ENST00000389328 Q6YL49 198 aa9.49□□□□□ -0.89
TRAPPC9-201ENST00000389328 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
TRAPPC9-201ENST00000389328 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
TRAPPC9-201ENST00000389328 A0A087WYN8 130 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 Q8N2B8 174 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 ZNF702PQ9H963 129 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 KLK12Q9UKR0 248 aa9.48□□□□□ -0.89
TRAPPC9-201ENST00000389328 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
TRAPPC9-201ENST00000389328 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
TRAPPC9-201ENST00000389328 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
TRAPPC9-201ENST00000389328 PRO0255Q9UI72 69 aa9.47□□□□□ -0.89
TRAPPC9-201ENST00000389328 LRRC75A-AS1Q8N1F1 130 aa9.46□□□□□ -0.89
TRAPPC9-201ENST00000389328 TMEM258P61165 79 aa9.46□□□□□ -0.9
TRAPPC9-201ENST00000389328 DEFB135Q30KP9 77 aa9.46□□□□□ -0.9
TRAPPC9-201ENST00000389328 RPL28P46779 137 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 NREPQ16612 68 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 TRBV7-7A0A0K0K1E9 115 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 TRBV6-4A0A1B0GX49 114 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 F8WEM9 126 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 PRB2P02812 416 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
TRAPPC9-201ENST00000389328 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-201ENST00000389328 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-201ENST00000389328 Q6JHZ5 121 aa9.44□□□□□ -0.9
TRAPPC9-201ENST00000389328 APOC4P55056 127 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 XAGE1AQ9HD64 81 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 REG3AQ06141 175 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 SNURFQ9Y675 71 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 FLNBO75369 2602 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
TRAPPC9-201ENST00000389328 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 IGHV4-31P0DP07 118 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 ATP5EP2Q5VTU8 51 aa9.42□□□□□ -0.9
TRAPPC9-201ENST00000389328 BRI3O95415 125 aa9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 MUC4Q99102 2169 aa9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 Q6ZQY7 126 aa9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
TRAPPC9-201ENST00000389328 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
TRAPPC9-201ENST00000389328 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
TRAPPC9-201ENST00000389328 SMIM9A6NGZ8 99 aa9.4□□□□□ -0.91
TRAPPC9-201ENST00000389328 HIGD2BQ4VC39 106 aa9.4□□□□□ -0.91
TRAPPC9-201ENST00000389328 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 COX7BP24311 80 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 BBC3Q96PG8 261 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 FAM218AQ96MZ4 157 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 LITAFQ99732 161 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 NDUFC2O95298 119 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 PDE6GP18545 87 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 BRK1Q8WUW1 75 aa9.39□□□□□ -0.91
TRAPPC9-201ENST00000389328 CCKP06307 115 aa9.38□□□□□ -0.91
TRAPPC9-201ENST00000389328 PRORYQ9H606 182 aa9.38□□□□□ -0.91
TRAPPC9-201ENST00000389328 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
TRAPPC9-201ENST00000389328 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms