RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 C10orf128Q5T292 105 aa-4.3□□□□□ -3.1
SNORA40-201ENST00000388090 HEPN1Q6WQI6 88 aa-4.3□□□□□ -3.1
SNORA40-201ENST00000388090 STX12Q86Y82 276 aa-4.3□□□□□ -3.1
SNORA40-201ENST00000388090 CALML5Q9NZT1 146 aa-4.3□□□□□ -3.1
SNORA40-201ENST00000388090 IGLC7A0M8Q6 106 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 M0QX08 132 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 MT-ND4LP03901 98 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 BTG2P78543 158 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 LINC01600Q96MT4 127 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 TRRAPQ9Y4A5 3859 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 DNAH5Q8TE73 4624 aa-4.31□□□□□ -3.1
SNORA40-201ENST00000388090 A0A0G2JMZ2 1700 aa-4.32□□□□□ -3.1
SNORA40-201ENST00000388090 A0A1W2PRE2 83 aa-4.32□□□□□ -3.1
SNORA40-201ENST00000388090 CTXN2P0C2S0 81 aa-4.32□□□□□ -3.1
SNORA40-201ENST00000388090 TMEM78Q5T7P6 136 aa-4.32□□□□□ -3.1
SNORA40-201ENST00000388090 CFAP53Q96M91 514 aa-4.32□□□□□ -3.1
SNORA40-201ENST00000388090 TRBV20-1A0A075B6N2 111 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 PAEPP09466 180 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 S100A7L2Q5SY68 101 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 PTRHD1Q6GMV3 140 aaKnown RBP-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 AKAP14Q86UN6 197 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 CEP19Q96LK0 163 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 CDKN2A-AS1Q9UH64 79 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 CCDC141Q6ZP82 1450 aa-4.33□□□□□ -3.1
SNORA40-201ENST00000388090 DOCK2Q92608 1830 aa-4.34□□□□□ -3.1
SNORA40-201ENST00000388090 RGS21Q2M5E4 152 aa-4.34□□□□□ -3.1
SNORA40-201ENST00000388090 FDCSPQ8NFU4 85 aa-4.34□□□□□ -3.1
SNORA40-201ENST00000388090 SPRR4Q96PI1 79 aa-4.34□□□□□ -3.1
SNORA40-201ENST00000388090 HCG22E2RYF7 251 aa-4.35□□□□□ -3.11
SNORA40-201ENST00000388090 B2MP61769 119 aa-4.35□□□□□ -3.11
SNORA40-201ENST00000388090 TMEM244Q5VVB8 128 aa-4.35□□□□□ -3.11
SNORA40-201ENST00000388090 PPP1R2P3Q6NXS1 205 aa-4.35□□□□□ -3.11
SNORA40-201ENST00000388090 OVOS2A0A0G2JMS6 1433 aa-4.36□□□□□ -3.11
SNORA40-201ENST00000388090 TRAV30A0A087WSZ9 112 aa-4.36□□□□□ -3.11
SNORA40-201ENST00000388090 MRPL34Q9BQ48 92 aaKnown RBP-4.36□□□□□ -3.11
SNORA40-201ENST00000388090 SELENOSQ9BQE4 189 aa-4.36□□□□□ -3.11
SNORA40-201ENST00000388090 SEC11CQ9BY50 192 aa-4.36□□□□□ -3.11
SNORA40-201ENST00000388090 DPM2O94777 84 aa-4.37□□□□□ -3.11
SNORA40-201ENST00000388090 AQP10Q96PS8 301 aa-4.37□□□□□ -3.11
SNORA40-201ENST00000388090 IFT140Q96RY7 1462 aa-4.37□□□□□ -3.11
SNORA40-201ENST00000388090 SFT2D2O95562 160 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 IL5P05113 134 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 MGPP08493 103 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 SERPINB1P30740 379 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 RPS28P62857 69 aaKnown RBP-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 TTC9CQ8N5M4 171 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 BCORQ6W2J9 1755 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 ITPR2Q14571 2701 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 NCOA3Q9Y6Q9 1424 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 QRICH2Q9H0J4 1663 aa-4.38□□□□□ -3.11
SNORA40-201ENST00000388090 MT1EP04732 61 aa-4.39□□□□□ -3.11
SNORA40-201ENST00000388090 LCN9Q8WX39 176 aa-4.39□□□□□ -3.11
SNORA40-201ENST00000388090 HIGD1BQ9P298 99 aa-4.39□□□□□ -3.11
SNORA40-201ENST00000388090 CCL22O00626 93 aa-4.4□□□□□ -3.11
SNORA40-201ENST00000388090 CMPK1P30085 196 aa-4.4□□□□□ -3.11
SNORA40-201ENST00000388090 PARVGQ9HBI0 331 aa-4.4□□□□□ -3.11
SNORA40-201ENST00000388090 SYNMO15061 1565 aa-4.4□□□□□ -3.11
SNORA40-201ENST00000388090 TMEM2Q9UHN6 1383 aa-4.4□□□□□ -3.11
SNORA40-201ENST00000388090 TRAV13-2A0A0B4J235 113 aa-4.41□□□□□ -3.12
SNORA40-201ENST00000388090 MNS1Q8NEH6 495 aa-4.41□□□□□ -3.12
SNORA40-201ENST00000388090 FAM167A-AS1Q96KT0 104 aa-4.41□□□□□ -3.12
SNORA40-201ENST00000388090 PRG4Q92954 1404 aaPredicted RBP-4.41□□□□□ -3.12
SNORA40-201ENST00000388090 XRN1Q8IZH2 1706 aaKnown RBP-4.41□□□□□ -3.12
SNORA40-201ENST00000388090 MYH7P12883 1935 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 PFDN1O60925 122 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 UBA52P62987 128 aaKnown RBP-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 SPTAN1Q13813 2472 aaKnown RBP-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 PPIP5K1Q6PFW1 1433 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 OR9Q1Q8NGQ5 310 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 ARAP2Q8WZ64 1704 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 SAR1AQ9NR31 198 aa-4.42□□□□□ -3.12
SNORA40-201ENST00000388090 C1orf167Q5SNV9 1468 aa-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 SYNJ1O43426 1573 aa-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 DMXL2Q8TDJ6 3036 aa-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 MAGOHBQ96A72 148 aaKnown RBP-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 DNAH10Q8IVF4 4471 aa-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 SPTBN5Q9NRC6 3674 aaKnown RBP-4.43□□□□□ -3.12
SNORA40-201ENST00000388090 M0R129 80 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 HMGN4O00479 90 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 REEP5Q00765 189 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 CTAGE3PQ8IX95 158 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 OR8I2Q8N0Y5 310 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 DYNLRB1Q9NP97 96 aa-4.44□□□□□ -3.12
SNORA40-201ENST00000388090 LOC100130705A0A1B0GUX0 176 aa-4.45□□□□□ -3.12
SNORA40-201ENST00000388090 Q6ZUT4 128 aa-4.45□□□□□ -3.12
SNORA40-201ENST00000388090 SPTSSAQ969W0 71 aa-4.45□□□□□ -3.12
SNORA40-201ENST00000388090 SNCGO76070 127 aa-4.46□□□□□ -3.12
SNORA40-201ENST00000388090 NDUFB6O95139 128 aa-4.46□□□□□ -3.12
SNORA40-201ENST00000388090 SMR3BP02814 79 aaPredicted RBP-4.46□□□□□ -3.12
SNORA40-201ENST00000388090 MT1LQ93083 61 aa-4.46□□□□□ -3.12
SNORA40-201ENST00000388090 BOLA2Q9H3K6 86 aa-4.46□□□□□ -3.12
SNORA40-201ENST00000388090 IGLC1P0CG04 106 aa-4.47□□□□□ -3.13
SNORA40-201ENST00000388090 MT1GP13640 62 aa-4.47□□□□□ -3.13
SNORA40-201ENST00000388090 FGF7P21781 194 aa-4.47□□□□□ -3.13
SNORA40-201ENST00000388090 MGST2Q99735 147 aa-4.47□□□□□ -3.13
SNORA40-201ENST00000388090 TLN1Q9Y490 2541 aaKnown RBP-4.47□□□□□ -3.13
SNORA40-201ENST00000388090 MYH6P13533 1939 aa-4.48□□□□□ -3.13
SNORA40-201ENST00000388090 RRAS2P62070 204 aaPredicted RBP-4.48□□□□□ -3.13
SNORA40-201ENST00000388090 SEC11AP67812 179 aa-4.48□□□□□ -3.13
SNORA40-201ENST00000388090 TAC4Q86UU9 113 aa-4.48□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms