RNA–Protein interactions for RNA: ENST00000385041.1

MIR548A1-201, Transcript of microRNA 548a-1, humanhuman

BASIC

Gene MIR548A1, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1-201ENST00000385041 ZFYVE9O95405 1425 aa-2.63□□□□□ -2.83
MIR548A1-201ENST00000385041 CDC42BPAQ5VT25 1732 aa-2.63□□□□□ -2.83
MIR548A1-201ENST00000385041 ERCC6Q03468 1493 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 KDM5CP41229 1560 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 SIX6O95475 246 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 SEC11AP67812 179 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 PSPHP78330 225 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 TMED4Q7Z7H5 227 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 WFDC9Q8NEX5 89 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 FAM167A-AS1Q96KT0 104 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 CCDC42Q96M95 316 aa-2.64□□□□□ -2.83
MIR548A1-201ENST00000385041 MBD5Q9P267 1494 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 BTAF1O14981 1849 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 ERICH2A1L162 156 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 SFT2D2O95562 160 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 CBLN1P23435 193 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 MAGOHP61326 146 aaKnown RBP-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 LSM6P62312 80 aaKnown RBP-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 TPT1P8Q9HAU6 139 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 ARMC1Q9NVT9 282 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 LAMTOR2Q9Y2Q5 125 aa-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 LSM2Q9Y333 95 aaKnown RBP-2.65□□□□□ -2.83
MIR548A1-201ENST00000385041 CLIP1P30622 1438 aa-2.66□□□□□ -2.83
MIR548A1-201ENST00000385041 SPAARA0A1B0GVQ0 90 aa-2.66□□□□□ -2.84
MIR548A1-201ENST00000385041 ARHGEF10O15013 1369 aa-2.66□□□□□ -2.84
MIR548A1-201ENST00000385041 C1orf167Q5SNV9 1468 aa-2.66□□□□□ -2.84
MIR548A1-201ENST00000385041 DAPK1P53355 1430 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 PRG4Q92954 1404 aaPredicted RBP-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 MYH6P13533 1939 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 E7EQ34 232 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 ATG12O94817 140 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 S100A7L2Q5SY68 101 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 TTC9CQ8N5M4 171 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 MED31Q9Y3C7 131 aa-2.67□□□□□ -2.84
MIR548A1-201ENST00000385041 XRN1Q8IZH2 1706 aaKnown RBP-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 QRICH2Q9H0J4 1663 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 HLA-DRB4P13762 266 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 AQP10Q96PS8 301 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 TRAPPC2LQ9UL33 140 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 HLA-DRB4X5D2U9 266 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 NWD2Q9ULI1 1742 aa-2.68□□□□□ -2.84
MIR548A1-201ENST00000385041 PLEKHH2Q8IVE3 1493 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 A0A1B0GU69 56 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 HSBP1L1C9JCN9 74 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 HMGN4O00479 90 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 RPP14O95059 124 aaKnown RBP-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 IGLC1P0CG04 106 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 RRAS2P62070 204 aaPredicted RBP-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 MIC13Q5XKP0 118 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 C5orf38Q86SI9 138 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 DYDC1Q8WWB3 177 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 SEC11CQ9BY50 192 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 PRO1933Q9H354 126 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 COPZ2Q9P299 210 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 UBE2D4Q9Y2X8 147 aa-2.69□□□□□ -2.84
MIR548A1-201ENST00000385041 FAM223BA6NKX1 122 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 TMEM238C9JI98 176 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 DEFB4AO15263 64 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 BANF2Q9H503 90 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 DYNLRB1Q9NP97 96 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 FAIMQ9NVQ4 179 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 PPIP5K1Q6PFW1 1433 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 DOCK2Q92608 1830 aa-2.7□□□□□ -2.84
MIR548A1-201ENST00000385041 IFT140Q96RY7 1462 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 TRAV13-2A0A0B4J235 113 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 SMIM24O75264 130 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 NIPSNAP2O75323 286 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 FAM107AO95990 144 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 TNP1P09430 55 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 TPM1P09493 284 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 HIST1H1DP16402 221 aaKnown RBP-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 SNCAP37840 140 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 SPA17Q15506 151 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 FAM24BQ8N5W8 94 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 SMG6Q86US8 1419 aaKnown RBP-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 NLRP1Q9C000 1473 aa-2.71□□□□□ -2.84
MIR548A1-201ENST00000385041 SPTY2D1-AS1A0A0U1RR47 76 aa-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 IL5P05113 134 aa-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 POLR2HP52434 150 aaKnown RBP-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 EDC4Q6P2E9 1401 aaKnown RBP-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 OR13C6PQ8NH95 151 aa-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 MGST2Q99735 147 aa-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 NKIRAS1Q9NYS0 192 aa-2.72□□□□□ -2.84
MIR548A1-201ENST00000385041 MAGI2Q86UL8 1455 aa-2.72□□□□□ -2.85
MIR548A1-201ENST00000385041 EIF3AQ14152 1382 aaKnown RBP-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 TRBV20-1A0A075B6N2 111 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 NDUFA3O95167 84 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 MT-ND4LP03901 98 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 MRPL54Q6P161 138 aaKnown RBP-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 PRAP1Q96NZ9 151 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 PARVGQ9HBI0 331 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 NXT2Q9NPJ8 142 aaKnown RBP-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 CALML5Q9NZT1 146 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 FYCO1Q9BQS8 1478 aa-2.73□□□□□ -2.85
MIR548A1-201ENST00000385041 MYO15AQ9UKN7 3530 aa-2.74□□□□□ -2.85
MIR548A1-201ENST00000385041 SMIM23A6NLE4 172 aa-2.74□□□□□ -2.85
MIR548A1-201ENST00000385041 WHAMMP3Q1A5X7 153 aa-2.74□□□□□ -2.85
MIR548A1-201ENST00000385041 NMSQ5H8A3 153 aa-2.74□□□□□ -2.85
MIR548A1-201ENST00000385041 PPP1R2P3Q6NXS1 205 aa-2.74□□□□□ -2.85
MIR548A1-201ENST00000385041 FAM223AQ8IWN6 122 aa-2.74□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms