RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 PRSS1P07477 247 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 GCSHP23434 173 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
CD9-202ENST00000382515 A0A087WZ39 114 aa11.55□□□□□ -0.56
CD9-202ENST00000382515 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
CD9-202ENST00000382515 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
CD9-202ENST00000382515 SERF1AO75920 110 aa11.55□□□□□ -0.56
CD9-202ENST00000382515 CNBPP62633 177 aaKnown RBP11.55□□□□□ -0.56
CD9-202ENST00000382515 PKHD1P08F94 4074 aa11.55□□□□□ -0.56
CD9-202ENST00000382515 F8WDY8 70 aa11.54□□□□□ -0.56
CD9-202ENST00000382515 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
CD9-202ENST00000382515 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
CD9-202ENST00000382515 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
CD9-202ENST00000382515 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
CD9-202ENST00000382515 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
CD9-202ENST00000382515 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.53□□□□□ -0.56
CD9-202ENST00000382515 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
CD9-202ENST00000382515 OR10D4PQ8NGN7 298 aa11.53□□□□□ -0.56
CD9-202ENST00000382515 DYNC1H1Q14204 4646 aaKnown RBP11.52□□□□□ -0.56
CD9-202ENST00000382515 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
CD9-202ENST00000382515 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.57
CD9-202ENST00000382515 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
CD9-202ENST00000382515 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
CD9-202ENST00000382515 COX6A2Q02221 97 aa11.51□□□□□ -0.57
CD9-202ENST00000382515 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
CD9-202ENST00000382515 ZC2HC1BQ5TFG8 222 aa11.51□□□□□ -0.57
CD9-202ENST00000382515 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
CD9-202ENST00000382515 TRAV12-1A0A0B4J245 112 aa11.5□□□□□ -0.57
CD9-202ENST00000382515 NDUFA6P56556 154 aa11.5□□□□□ -0.57
CD9-202ENST00000382515 LINC00310P59036 64 aa11.5□□□□□ -0.57
CD9-202ENST00000382515 FAM19A2Q8N3H0 131 aa11.5□□□□□ -0.57
CD9-202ENST00000382515 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
CD9-202ENST00000382515 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
CD9-202ENST00000382515 DNAH5Q8TE73 4624 aa11.49□□□□□ -0.57
CD9-202ENST00000382515 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
CD9-202ENST00000382515 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
CD9-202ENST00000382515 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
CD9-202ENST00000382515 IGLV5-45A0A087WSX0 123 aa11.48□□□□□ -0.57
CD9-202ENST00000382515 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
CD9-202ENST00000382515 H3BRM9 83 aa11.47□□□□□ -0.57
CD9-202ENST00000382515 NUPR1O60356 82 aa11.47□□□□□ -0.57
CD9-202ENST00000382515 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
CD9-202ENST00000382515 CDKN2A-AS1Q9UH64 79 aa11.47□□□□□ -0.57
CD9-202ENST00000382515 SLPIP03973 132 aa11.46□□□□□ -0.57
CD9-202ENST00000382515 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
CD9-202ENST00000382515 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
CD9-202ENST00000382515 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
CD9-202ENST00000382515 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
CD9-202ENST00000382515 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
CD9-202ENST00000382515 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
CD9-202ENST00000382515 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
CD9-202ENST00000382515 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
CD9-202ENST00000382515 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
CD9-202ENST00000382515 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
CD9-202ENST00000382515 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
CD9-202ENST00000382515 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
CD9-202ENST00000382515 F8VRH5 84 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 PRSS2P07478 247 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 FABP4P15090 132 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 Q8IZM0 81 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 CHAC1Q9BUX1 264 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 KRTAP17-1Q9BYP8 105 aa11.42□□□□□ -0.58
CD9-202ENST00000382515 NDUFA1O15239 70 aa11.41□□□□□ -0.58
CD9-202ENST00000382515 KIAA0087Q14695 138 aa11.41□□□□□ -0.58
CD9-202ENST00000382515 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
CD9-202ENST00000382515 Q6ZSA8 131 aa11.4□□□□□ -0.58
CD9-202ENST00000382515 CXCL5P42830 114 aa11.39□□□□□ -0.59
CD9-202ENST00000382515 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
CD9-202ENST00000382515 LINC00474Q9P2X8 69 aa11.39□□□□□ -0.59
CD9-202ENST00000382515 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
CD9-202ENST00000382515 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
CD9-202ENST00000382515 CKS1BP61024 79 aa11.38□□□□□ -0.59
CD9-202ENST00000382515 TRBV30A0A0K0K1B3 111 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 S100A6P06703 90 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 PLNP26678 52 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 ODF1Q14990 250 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 Q6ZRU5 148 aa11.37□□□□□ -0.59
CD9-202ENST00000382515 IGLV5-39A0A0G2JS06 123 aa11.36□□□□□ -0.59
CD9-202ENST00000382515 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
CD9-202ENST00000382515 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
CD9-202ENST00000382515 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CD9-202ENST00000382515 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
CD9-202ENST00000382515 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
CD9-202ENST00000382515 SYS1-DBNDD2H3BUS1 97 aa11.34□□□□□ -0.59
CD9-202ENST00000382515 SPINK8P0C7L1 97 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms