RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 DYNC1H1Q14204 4646 aaKnown RBP12.8□□□□□ -0.36
GTF3A-201ENST00000381140 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-201ENST00000381140 IGLV4-3A0A075B6K6 122 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 TRAV8-4A0A0B4J246 113 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 C20orf202A1L168 122 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 PAPPA-AS1Q5QFB9 102 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
GTF3A-201ENST00000381140 IGLV5-52A0A0A0MRZ9 124 aa12.79□□□□□ -0.36
GTF3A-201ENST00000381140 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
GTF3A-201ENST00000381140 PRSS1P07477 247 aa12.79□□□□□ -0.36
GTF3A-201ENST00000381140 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
GTF3A-201ENST00000381140 CDPF1Q6NVV7 123 aa12.78□□□□□ -0.36
GTF3A-201ENST00000381140 FAM104AQ969W3 186 aa12.78□□□□□ -0.36
GTF3A-201ENST00000381140 USP17L23D6RBM5 183 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 H0Y8G0 127 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 ODF1Q14990 250 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
GTF3A-201ENST00000381140 KRTAP26-1Q6PEX3 210 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
GTF3A-201ENST00000381140 GAGE12HA6NDE8 117 aa12.76□□□□□ -0.37
GTF3A-201ENST00000381140 PMVKQ15126 192 aa12.76□□□□□ -0.37
GTF3A-201ENST00000381140 AMELXQ99217 191 aa12.76□□□□□ -0.37
GTF3A-201ENST00000381140 Q6ZUT4 128 aa12.75□□□□□ -0.37
GTF3A-201ENST00000381140 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-201ENST00000381140 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-201ENST00000381140 OPRPNQ99935 248 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-201ENST00000381140 VCX2Q9H322 139 aa12.74□□□□□ -0.37
GTF3A-201ENST00000381140 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
GTF3A-201ENST00000381140 LINC00959A0A1B0GUT2 108 aa12.73□□□□□ -0.37
GTF3A-201ENST00000381140 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
GTF3A-201ENST00000381140 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
GTF3A-201ENST00000381140 F8VRH5 84 aa12.72□□□□□ -0.37
GTF3A-201ENST00000381140 GCSHP23434 173 aa12.72□□□□□ -0.37
GTF3A-201ENST00000381140 XCL1P47992 114 aa12.72□□□□□ -0.37
GTF3A-201ENST00000381140 TEX43Q6ZNM6 134 aa12.72□□□□□ -0.37
GTF3A-201ENST00000381140 CCL25O15444 150 aa12.71□□□□□ -0.37
GTF3A-201ENST00000381140 SS18Q15532 418 aa12.71□□□□□ -0.37
GTF3A-201ENST00000381140 PMCHL2Q9BQD1 86 aa12.71□□□□□ -0.37
GTF3A-201ENST00000381140 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
GTF3A-201ENST00000381140 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.37
GTF3A-201ENST00000381140 KRTAP10-1P60331 282 aa12.7□□□□□ -0.38
GTF3A-201ENST00000381140 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
GTF3A-201ENST00000381140 C12orf57Q99622 126 aa12.7□□□□□ -0.38
GTF3A-201ENST00000381140 C2orf88Q9BSF0 95 aa12.7□□□□□ -0.38
GTF3A-201ENST00000381140 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
GTF3A-201ENST00000381140 DPM2O94777 84 aa12.69□□□□□ -0.38
GTF3A-201ENST00000381140 PLNP26678 52 aa12.69□□□□□ -0.38
GTF3A-201ENST00000381140 DNAH5Q8TE73 4624 aa12.68□□□□□ -0.38
GTF3A-201ENST00000381140 IGLV4-69A0A075B6H9 119 aa12.68□□□□□ -0.38
GTF3A-201ENST00000381140 IGKCP01834 107 aa12.68□□□□□ -0.38
GTF3A-201ENST00000381140 LINC01620Q4KN68 170 aa12.68□□□□□ -0.38
GTF3A-201ENST00000381140 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
GTF3A-201ENST00000381140 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
GTF3A-201ENST00000381140 FOXI1Q12951 378 aa12.67□□□□□ -0.38
GTF3A-201ENST00000381140 ATOH7Q8N100 152 aa12.67□□□□□ -0.38
GTF3A-201ENST00000381140 IGLC3P0DOY3 106 aa12.66□□□□□ -0.38
GTF3A-201ENST00000381140 UBE2D1P51668 147 aa12.66□□□□□ -0.38
GTF3A-201ENST00000381140 FAM19A3Q7Z5A8 133 aa12.66□□□□□ -0.38
GTF3A-201ENST00000381140 S100A12P80511 92 aa12.65□□□□□ -0.38
GTF3A-201ENST00000381140 LRP1BQ9NZR2 4599 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 HIGD2BQ4VC39 106 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 CFAP161Q6P656 301 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 CD164L2Q6UWJ8 174 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 C15orf56Q8N910 161 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
GTF3A-201ENST00000381140 A0A0J9YXV3 536 aa12.63□□□□□ -0.39
GTF3A-201ENST00000381140 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
GTF3A-201ENST00000381140 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
GTF3A-201ENST00000381140 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
GTF3A-201ENST00000381140 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
GTF3A-201ENST00000381140 TINCRA0A1B0GVN0 87 aa12.62□□□□□ -0.39
GTF3A-201ENST00000381140 SEC11AP67812 179 aa12.62□□□□□ -0.39
GTF3A-201ENST00000381140 CHAC1Q9BUX1 264 aa12.62□□□□□ -0.39
GTF3A-201ENST00000381140 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
GTF3A-201ENST00000381140 MALP21145 153 aa12.6□□□□□ -0.39
GTF3A-201ENST00000381140 HAMPP81172 84 aa12.6□□□□□ -0.39
GTF3A-201ENST00000381140 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
GTF3A-201ENST00000381140 COX7A2LO14548 114 aa12.59□□□□□ -0.39
GTF3A-201ENST00000381140 LINC00242Q5T6M2 205 aa12.59□□□□□ -0.39
GTF3A-201ENST00000381140 C5orf38Q86SI9 138 aa12.59□□□□□ -0.39
GTF3A-201ENST00000381140 PAM16Q9Y3D7 125 aa12.59□□□□□ -0.39
GTF3A-201ENST00000381140 IGLV5-45A0A087WSX0 123 aa12.58□□□□□ -0.4
GTF3A-201ENST00000381140 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
GTF3A-201ENST00000381140 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
GTF3A-201ENST00000381140 HERVK_113P63121 156 aa12.58□□□□□ -0.4
GTF3A-201ENST00000381140 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
GTF3A-201ENST00000381140 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
GTF3A-201ENST00000381140 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
GTF3A-201ENST00000381140 FAM30AQ9NZY2 134 aa12.57□□□□□ -0.4
GTF3A-201ENST00000381140 RYR1P21817 5038 aa12.57□□□□□ -0.4
GTF3A-201ENST00000381140 STPG4Q8N801 248 aa12.56□□□□□ -0.4
GTF3A-201ENST00000381140 GVQW2A0A096LPI5 108 aaPredicted RBP12.56□□□□□ -0.4
GTF3A-201ENST00000381140 SLPIP03973 132 aa12.56□□□□□ -0.4
GTF3A-201ENST00000381140 ANKRD39Q53RE8 183 aa12.56□□□□□ -0.4
GTF3A-201ENST00000381140 TMEM170BQ5T4T1 132 aa12.56□□□□□ -0.4
GTF3A-201ENST00000381140 HERC2O95714 4834 aa12.55□□□□□ -0.4
GTF3A-201ENST00000381140 APOBP04114 4563 aaKnown RBP12.55□□□□□ -0.4
GTF3A-201ENST00000381140 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms