RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ATP6V0E2Q8NHE4 81 aa16.22■□□□□ 0.19
VPS16-201ENST00000380443 PRO1854Q9UHT4 67 aa16.22■□□□□ 0.19
VPS16-201ENST00000380443 A4D1N5 150 aa16.21■□□□□ 0.19
VPS16-201ENST00000380443 IFITM1P13164 125 aa16.21■□□□□ 0.19
VPS16-201ENST00000380443 DEFB135Q30KP9 77 aa16.21■□□□□ 0.19
VPS16-201ENST00000380443 TSPAN13O95857 204 aa16.2■□□□□ 0.18
VPS16-201ENST00000380443 GYPEP15421 78 aa16.2■□□□□ 0.18
VPS16-201ENST00000380443 CIRBPQ14011 172 aaKnown RBP16.2■□□□□ 0.18
VPS16-201ENST00000380443 F8W1H4 67 aa16.19■□□□□ 0.18
VPS16-201ENST00000380443 MIAQ16674 131 aa16.19■□□□□ 0.18
VPS16-201ENST00000380443 CHCHD5Q9BSY4 110 aa16.19■□□□□ 0.18
VPS16-201ENST00000380443 SMIM1B2RUZ4 78 aa16.19■□□□□ 0.18
VPS16-201ENST00000380443 GAGE6Q13070 117 aa16.19■□□□□ 0.18
VPS16-201ENST00000380443 OCIAD2Q56VL3 154 aa16.18■□□□□ 0.18
VPS16-201ENST00000380443 IGHV4-28A0A0C4DH34 117 aa16.17■□□□□ 0.18
VPS16-201ENST00000380443 F5H768 121 aa16.17■□□□□ 0.18
VPS16-201ENST00000380443 K7ERU9 68 aa16.17■□□□□ 0.18
VPS16-201ENST00000380443 PAX4O43316 350 aa16.16■□□□□ 0.18
VPS16-201ENST00000380443 HERV-K104P63124 156 aa16.16■□□□□ 0.18
VPS16-201ENST00000380443 COPS9Q8WXC6 57 aa16.16■□□□□ 0.18
VPS16-201ENST00000380443 A0A1B0GUV1 79 aa16.15■□□□□ 0.18
VPS16-201ENST00000380443 A8MZ25 164 aa16.15■□□□□ 0.18
VPS16-201ENST00000380443 DAD1P61803 113 aa16.15■□□□□ 0.18
VPS16-201ENST00000380443 Q8NAQ8 132 aa16.15■□□□□ 0.18
VPS16-201ENST00000380443 TRBV20-1A0A075B6N2 111 aa16.14■□□□□ 0.17
VPS16-201ENST00000380443 PRSS2P07478 247 aa16.14■□□□□ 0.17
VPS16-201ENST00000380443 IGHV4-30-4P0DP06 118 aa16.14■□□□□ 0.17
VPS16-201ENST00000380443 SPART-AS1P0CW21 52 aa16.13■□□□□ 0.17
VPS16-201ENST00000380443 ADAMTSL4-AS1Q5T5F5 129 aa16.13■□□□□ 0.17
VPS16-201ENST00000380443 TEX48A0A1B0GUV7 120 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 IGHV3-33P01772 117 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 ATP5G1P05496 136 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 C21orf62-AS1Q17RA5 79 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 Q9H8V8 135 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 ERG28Q9UKR5 140 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 TRAV26-1A0A087WT03 109 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 PPDPFQ9H3Y8 114 aa16.12■□□□□ 0.17
VPS16-201ENST00000380443 IGLV4-60A0A075B6I1 120 aa16.11■□□□□ 0.17
VPS16-201ENST00000380443 LOC107984156A0A0G2JMH3 177 aa16.11■□□□□ 0.17
VPS16-201ENST00000380443 ARL17AQ8IVW1 177 aa16.11■□□□□ 0.17
VPS16-201ENST00000380443 H3BMG7 143 aa16.1■□□□□ 0.17
VPS16-201ENST00000380443 ZNF625Q96I27 306 aaPredicted RBP16.1■□□□□ 0.17
VPS16-201ENST00000380443 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
VPS16-201ENST00000380443 IGHV3OR16-9A0A0B4J2B5 98 aa16.07■□□□□ 0.16
VPS16-201ENST00000380443 SFTA2Q6UW10 78 aa16.07■□□□□ 0.16
VPS16-201ENST00000380443 EIF4EBP3O60516 100 aaPredicted RBP16.06■□□□□ 0.16
VPS16-201ENST00000380443 RBX1P62877 108 aa16.06■□□□□ 0.16
VPS16-201ENST00000380443 A0A087WZ39 114 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 LINC01561Q8N1V8 128 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 LINC00959A0A1B0GUT2 108 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 TMEM262E9PQX1 116 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 SCGB1C2P0DMR2 95 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 PSMB2P49721 201 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 EGFEM1PQ0D2K5 195 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 COX7B2Q8TF08 81 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 PRO0461Q9UI25 63 aa16.05■□□□□ 0.16
VPS16-201ENST00000380443 DEFB4AO15263 64 aa16.04■□□□□ 0.16
VPS16-201ENST00000380443 SS18Q15532 418 aa16.04■□□□□ 0.16
VPS16-201ENST00000380443 MRPL23Q16540 153 aaKnown RBP16.03■□□□□ 0.16
VPS16-201ENST00000380443 TRRAPQ9Y4A5 3859 aa16.03■□□□□ 0.16
VPS16-201ENST00000380443 TRBV30A0A0K0K1B3 111 aa16.03■□□□□ 0.16
VPS16-201ENST00000380443 VWFP04275 2813 aa16.02■□□□□ 0.16
VPS16-201ENST00000380443 MEIG1Q5JSS6 88 aa16.02■□□□□ 0.16
VPS16-201ENST00000380443 LINC00308Q8TCZ7 52 aa16.02■□□□□ 0.16
VPS16-201ENST00000380443 CELA1Q9UNI1 258 aa16.02■□□□□ 0.16
VPS16-201ENST00000380443 WFDC2Q14508 124 aa16.01■□□□□ 0.15
VPS16-201ENST00000380443 IGKV3OR2-268A0A0C4DH90 116 aa16■□□□□ 0.15
VPS16-201ENST00000380443 G3V4G9 280 aa16■□□□□ 0.15
VPS16-201ENST00000380443 Q1RN00 199 aa16■□□□□ 0.15
VPS16-201ENST00000380443 TCL1BO95988 128 aa15.99■□□□□ 0.15
VPS16-201ENST00000380443 OXLD1Q5BKU9 147 aa15.98■□□□□ 0.15
VPS16-201ENST00000380443 ICOSQ9Y6W8 199 aa15.98■□□□□ 0.15
VPS16-201ENST00000380443 PKD1L1Q8TDX9 2849 aa15.96■□□□□ 0.15
VPS16-201ENST00000380443 J3QR89 54 aa15.96■□□□□ 0.15
VPS16-201ENST00000380443 KRTAP10-11P60412 298 aa15.96■□□□□ 0.15
VPS16-201ENST00000380443 COX6CP09669 75 aa15.96■□□□□ 0.14
VPS16-201ENST00000380443 LELP1Q5T871 98 aa15.96■□□□□ 0.14
VPS16-201ENST00000380443 A0A096LPF7 62 aa15.95■□□□□ 0.14
VPS16-201ENST00000380443 NPC2P61916 151 aa15.95■□□□□ 0.14
VPS16-201ENST00000380443 RNF151Q2KHN1 245 aa15.95■□□□□ 0.14
VPS16-201ENST00000380443 H7C2G1 150 aa15.94■□□□□ 0.14
VPS16-201ENST00000380443 M0QXV9 152 aa15.94■□□□□ 0.14
VPS16-201ENST00000380443 DAND5Q8N907 189 aa15.94■□□□□ 0.14
VPS16-201ENST00000380443 ATXN8Q156A1 80 aa15.94■□□□□ 0.14
VPS16-201ENST00000380443 IBA57-AS1B1ANH7 110 aa15.93■□□□□ 0.14
VPS16-201ENST00000380443 H3BNG1 76 aa15.93■□□□□ 0.14
VPS16-201ENST00000380443 C5orf38Q86SI9 138 aa15.93■□□□□ 0.14
VPS16-201ENST00000380443 TOMM7Q9P0U1 55 aa15.93■□□□□ 0.14
VPS16-201ENST00000380443 VPS25Q9BRG1 176 aa15.92■□□□□ 0.14
VPS16-201ENST00000380443 ETDBQ3ZM63 59 aa15.91■□□□□ 0.14
VPS16-201ENST00000380443 CD164L2Q6UWJ8 174 aa15.91■□□□□ 0.14
VPS16-201ENST00000380443 Q8IZM0 81 aa15.91■□□□□ 0.14
VPS16-201ENST00000380443 C11orf68Q9H3H3 251 aaKnown RBP15.91■□□□□ 0.14
VPS16-201ENST00000380443 TRIAP1O43715 76 aa15.9■□□□□ 0.14
VPS16-201ENST00000380443 RPL13AP40429 203 aaKnown RBP15.9■□□□□ 0.14
VPS16-201ENST00000380443 HTN3P15516 51 aa15.89■□□□□ 0.13
VPS16-201ENST00000380443 XCL1P47992 114 aa15.89■□□□□ 0.13
VPS16-201ENST00000380443 SMCPP49901 116 aaPredicted RBP15.89■□□□□ 0.13
VPS16-201ENST00000380443 SOSTDC1Q6X4U4 206 aa15.89■□□□□ 0.13
VPS16-201ENST00000380443 A0A0U1RRA0 63 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms