RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 DEFB136Q30KP8 78 aa8.77□□□□□ -1.01
HERC6-203ENST00000380265 NCR3O14931 201 aa8.77□□□□□ -1.01
HERC6-203ENST00000380265 PAX4O43316 350 aa8.77□□□□□ -1.01
HERC6-203ENST00000380265 UBE2E2Q96LR5 201 aa8.77□□□□□ -1.01
HERC6-203ENST00000380265 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
HERC6-203ENST00000380265 XCL2Q9UBD3 114 aa8.76□□□□□ -1.01
HERC6-203ENST00000380265 A0A087WYN8 130 aa8.76□□□□□ -1.01
HERC6-203ENST00000380265 IGHV4-59P01825 116 aa8.76□□□□□ -1.01
HERC6-203ENST00000380265 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
HERC6-203ENST00000380265 CRYGAP11844 174 aa8.75□□□□□ -1.01
HERC6-203ENST00000380265 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
HERC6-203ENST00000380265 RNF152Q8N8N0 203 aa8.75□□□□□ -1.01
HERC6-203ENST00000380265 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
HERC6-203ENST00000380265 LINC00846Q9NV44 126 aa8.75□□□□□ -1.01
HERC6-203ENST00000380265 UCNP55089 124 aa8.75□□□□□ -1.01
HERC6-203ENST00000380265 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
HERC6-203ENST00000380265 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 LINC00337Q8N6G1 96 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 PSMB8P28062 276 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 DYNLRB2Q8TF09 96 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 C2orf48Q96LS8 159 aa8.74□□□□□ -1.01
HERC6-203ENST00000380265 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
HERC6-203ENST00000380265 SLURP1P55000 103 aa8.73□□□□□ -1.01
HERC6-203ENST00000380265 ITPR3Q14573 2671 aa8.73□□□□□ -1.01
HERC6-203ENST00000380265 HRCT1Q6UXD1 115 aa8.73□□□□□ -1.01
HERC6-203ENST00000380265 WFDC9Q8NEX5 89 aa8.73□□□□□ -1.01
HERC6-203ENST00000380265 OVOL2Q9BRP0 275 aa8.72□□□□□ -1.01
HERC6-203ENST00000380265 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
HERC6-203ENST00000380265 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
HERC6-203ENST00000380265 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
HERC6-203ENST00000380265 GNLYP22749 145 aa8.72□□□□□ -1.01
HERC6-203ENST00000380265 ZFHX3Q15911 3703 aa8.72□□□□□ -1.01
HERC6-203ENST00000380265 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
HERC6-203ENST00000380265 USP24Q9UPU5 2620 aa8.71□□□□□ -1.01
HERC6-203ENST00000380265 INSP01308 110 aa8.71□□□□□ -1.01
HERC6-203ENST00000380265 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.01
HERC6-203ENST00000380265 TRAV23DV6A0A075B6W5 121 aa8.71□□□□□ -1.02
HERC6-203ENST00000380265 TMEM258P61165 79 aa8.71□□□□□ -1.02
HERC6-203ENST00000380265 PKIGQ9Y2B9 76 aa8.71□□□□□ -1.02
HERC6-203ENST00000380265 MSMBP08118 114 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 COX7B2Q8TF08 81 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 DPH3Q96FX2 82 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 AVPP01185 164 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 PF4P02776 101 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 CCL19Q99731 98 aa8.7□□□□□ -1.02
HERC6-203ENST00000380265 IGHV4-30-2A0A087WSY4 118 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 HILS1P60008 231 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 Q6JHZ5 121 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 C10orf105Q8TEF2 133 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 Q96MF0 132 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 H0YGX0 51 aa8.69□□□□□ -1.02
HERC6-203ENST00000380265 C19orf84I3L1E1 186 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 GHRHP01286 108 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 CCL18P55774 89 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 F8P00451 2351 aa8.68□□□□□ -1.02
HERC6-203ENST00000380265 Q6ZTI0 123 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 MAPK1IP1LQ8NDC0 245 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 PRORYQ9H606 182 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 ORMDL1Q9P0S3 153 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 K7EQD1 137 aa8.67□□□□□ -1.02
HERC6-203ENST00000380265 RPS28P62857 69 aaKnown RBP8.67□□□□□ -1.02
HERC6-203ENST00000380265 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 F5H768 121 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 STHQ8IWL8 128 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
HERC6-203ENST00000380265 MGAM2Q2M2H8 2515 aa8.65□□□□□ -1.02
HERC6-203ENST00000380265 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
HERC6-203ENST00000380265 NOP10Q9NPE3 64 aaKnown RBP8.64□□□□□ -1.03
HERC6-203ENST00000380265 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
HERC6-203ENST00000380265 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
HERC6-203ENST00000380265 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
HERC6-203ENST00000380265 B4DSR2 109 aa8.63□□□□□ -1.03
HERC6-203ENST00000380265 C11orf44Q8N8P7 122 aa8.63□□□□□ -1.03
HERC6-203ENST00000380265 S100A7L2Q5SY68 101 aa8.63□□□□□ -1.03
HERC6-203ENST00000380265 FHL2Q14192 279 aa8.62□□□□□ -1.03
HERC6-203ENST00000380265 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
HERC6-203ENST00000380265 TMEM86BQ8N661 226 aa8.62□□□□□ -1.03
HERC6-203ENST00000380265 OXTP01178 125 aa8.61□□□□□ -1.03
HERC6-203ENST00000380265 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
HERC6-203ENST00000380265 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
HERC6-203ENST00000380265 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms