RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 ORAOV1Q8WV07 137 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 TIMM21Q9BVV7 248 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 C6orf48Q9UBA6 75 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 NAT8Q9UHE5 227 aa13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 TLX1NBP0CAT3 122 aa13.64□□□□□ -0.23
CDKN2B-202ENST00000380142 SMAGPQ0VAQ4 97 aa13.64□□□□□ -0.23
CDKN2B-202ENST00000380142 PRR4Q16378 134 aa13.64□□□□□ -0.23
CDKN2B-202ENST00000380142 IGHV3OR16-9A0A0B4J2B5 98 aa13.63□□□□□ -0.23
CDKN2B-202ENST00000380142 UNQ6190/PRO20217Q6UXQ8 127 aa13.63□□□□□ -0.23
CDKN2B-202ENST00000380142 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
CDKN2B-202ENST00000380142 PPP1R17O96001 155 aa13.61□□□□□ -0.23
CDKN2B-202ENST00000380142 RPL39P62891 51 aaKnown RBP13.61□□□□□ -0.23
CDKN2B-202ENST00000380142 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
CDKN2B-202ENST00000380142 NDUFA1O15239 70 aa13.6□□□□□ -0.23
CDKN2B-202ENST00000380142 RIGQ13278 110 aa13.6□□□□□ -0.23
CDKN2B-202ENST00000380142 V9GYV3 84 aa13.6□□□□□ -0.23
CDKN2B-202ENST00000380142 F8WDY8 70 aa13.59□□□□□ -0.23
CDKN2B-202ENST00000380142 GAGE2EQ4V326 116 aa13.59□□□□□ -0.23
CDKN2B-202ENST00000380142 KIR2DL4Q99706 377 aa13.59□□□□□ -0.23
CDKN2B-202ENST00000380142 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
CDKN2B-202ENST00000380142 MRPL51Q4U2R6 128 aaKnown RBP13.58□□□□□ -0.24
CDKN2B-202ENST00000380142 LCE2AQ5TA79 106 aaPredicted RBP13.58□□□□□ -0.24
CDKN2B-202ENST00000380142 FAT4Q6V0I7 4981 aa13.57□□□□□ -0.24
CDKN2B-202ENST00000380142 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
CDKN2B-202ENST00000380142 M0QXV9 152 aa13.56□□□□□ -0.24
CDKN2B-202ENST00000380142 PPP1R2P9O14990 202 aa13.56□□□□□ -0.24
CDKN2B-202ENST00000380142 TMEM18Q96B42 140 aa13.56□□□□□ -0.24
CDKN2B-202ENST00000380142 UBE2D1P51668 147 aa13.55□□□□□ -0.24
CDKN2B-202ENST00000380142 C9orf129Q5T035 196 aaKnown RBP13.54□□□□□ -0.24
CDKN2B-202ENST00000380142 FAM104BQ5XKR9 115 aa13.54□□□□□ -0.24
CDKN2B-202ENST00000380142 NAT8BQ9UHF3 227 aa13.53□□□□□ -0.24
CDKN2B-202ENST00000380142 TRBV24-1A0A075B6N3 115 aa13.52□□□□□ -0.25
CDKN2B-202ENST00000380142 RPL13AP40429 203 aaKnown RBP13.52□□□□□ -0.25
CDKN2B-202ENST00000380142 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.25
CDKN2B-202ENST00000380142 UBE2BP63146 152 aa13.52□□□□□ -0.25
CDKN2B-202ENST00000380142 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.25
CDKN2B-202ENST00000380142 C2orf82Q6UX34 121 aa13.51□□□□□ -0.25
CDKN2B-202ENST00000380142 COMMD7Q86VX2 200 aa13.51□□□□□ -0.25
CDKN2B-202ENST00000380142 C20orf78Q9BR46 151 aa13.51□□□□□ -0.25
CDKN2B-202ENST00000380142 SPANXA1Q9NS26 97 aa13.5□□□□□ -0.25
CDKN2B-202ENST00000380142 CARHSP1Q9Y2V2 147 aaKnown RBP13.5□□□□□ -0.25
CDKN2B-202ENST00000380142 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
CDKN2B-202ENST00000380142 LINC00862A6NCI5 91 aa13.49□□□□□ -0.25
CDKN2B-202ENST00000380142 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
CDKN2B-202ENST00000380142 A0A0U1RQV1 116 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 TCAPO15273 167 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 TNFRSF6BO95407 300 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 TSPAN13O95857 204 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 HBBP68871 147 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 UQCC3Q6UW78 93 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 SMIM2Q9BVW6 85 aa13.48□□□□□ -0.25
CDKN2B-202ENST00000380142 ADCYAP1P18509 176 aa13.47□□□□□ -0.25
CDKN2B-202ENST00000380142 CKS2P33552 79 aa13.47□□□□□ -0.25
CDKN2B-202ENST00000380142 NDUFC2-KCTD14E9PQ53 114 aa13.46□□□□□ -0.25
CDKN2B-202ENST00000380142 ZNF861PO60384 105 aa13.46□□□□□ -0.25
CDKN2B-202ENST00000380142 PNRC1Q12796 327 aaPredicted RBP13.46□□□□□ -0.25
CDKN2B-202ENST00000380142 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
CDKN2B-202ENST00000380142 TRBV30A0A0K0K1B3 111 aa13.45□□□□□ -0.26
CDKN2B-202ENST00000380142 TMEM218A2RU14 115 aa13.45□□□□□ -0.26
CDKN2B-202ENST00000380142 F8W036 122 aa13.45□□□□□ -0.26
CDKN2B-202ENST00000380142 NPYP01303 97 aa13.45□□□□□ -0.26
CDKN2B-202ENST00000380142 A0A087X002 238 aa13.44□□□□□ -0.26
CDKN2B-202ENST00000380142 A0A1B0GW15 77 aa13.44□□□□□ -0.26
CDKN2B-202ENST00000380142 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
CDKN2B-202ENST00000380142 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
CDKN2B-202ENST00000380142 D6R8Y8 96 aa13.43□□□□□ -0.26
CDKN2B-202ENST00000380142 MT-ND4LP03901 98 aa13.42□□□□□ -0.26
CDKN2B-202ENST00000380142 KRTAP9-6A0A140TA67 174 aa13.41□□□□□ -0.26
CDKN2B-202ENST00000380142 IGLV4-3A0A075B6K6 122 aa13.4□□□□□ -0.26
CDKN2B-202ENST00000380142 MUC17Q685J3 4493 aa13.39□□□□□ -0.27
CDKN2B-202ENST00000380142 S100A8P05109 93 aa13.39□□□□□ -0.27
CDKN2B-202ENST00000380142 ANAPC16Q96DE5 110 aa13.39□□□□□ -0.27
CDKN2B-202ENST00000380142 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
CDKN2B-202ENST00000380142 ZC2HC1BQ5TFG8 222 aa13.38□□□□□ -0.27
CDKN2B-202ENST00000380142 LINC00469Q8N7U9 141 aa13.38□□□□□ -0.27
CDKN2B-202ENST00000380142 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
CDKN2B-202ENST00000380142 SEC11CQ9BY50 192 aa13.38□□□□□ -0.27
CDKN2B-202ENST00000380142 CTDSP1Q9GZU7 261 aa13.38□□□□□ -0.27
CDKN2B-202ENST00000380142 PYGO1Q9Y3Y4 419 aa13.37□□□□□ -0.27
CDKN2B-202ENST00000380142 A0A1B0GXF2 115 aa13.36□□□□□ -0.27
CDKN2B-202ENST00000380142 NUPR1O60356 82 aa13.36□□□□□ -0.27
CDKN2B-202ENST00000380142 IFI27P40305 119 aaPredicted RBP13.36□□□□□ -0.27
CDKN2B-202ENST00000380142 PPBPP02775 128 aa13.35□□□□□ -0.27
CDKN2B-202ENST00000380142 LINC00173Q6ZV60 143 aa13.35□□□□□ -0.27
CDKN2B-202ENST00000380142 LINC01561Q8N1V8 128 aa13.35□□□□□ -0.27
CDKN2B-202ENST00000380142 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
CDKN2B-202ENST00000380142 RAB5AP20339 215 aa13.34□□□□□ -0.27
CDKN2B-202ENST00000380142 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
CDKN2B-202ENST00000380142 ANAPC11Q9NYG5 84 aa13.32□□□□□ -0.28
CDKN2B-202ENST00000380142 KRTAP13-2Q52LG2 175 aa13.31□□□□□ -0.28
CDKN2B-202ENST00000380142 ATP5L2Q7Z4Y8 100 aa13.31□□□□□ -0.28
CDKN2B-202ENST00000380142 TYMSOSQ8TAI1 123 aa13.31□□□□□ -0.28
CDKN2B-202ENST00000380142 RETNLBQ9BQ08 111 aa13.31□□□□□ -0.28
CDKN2B-202ENST00000380142 C10orf91Q5T1B1 145 aa13.3□□□□□ -0.28
CDKN2B-202ENST00000380142 ORMDL3Q8N138 153 aa13.3□□□□□ -0.28
CDKN2B-202ENST00000380142 CRYGAP11844 174 aa13.29□□□□□ -0.28
CDKN2B-202ENST00000380142 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms