RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TACC2O95359 2948 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 PCNX1Q96RV3 2341 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 RELNP78509 3460 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 IGSF10Q6WRI0 2623 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 COL6A6A6NMZ7 2263 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 M0QY20 66 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 ESRGQ1W209 222 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 FAM74A4Q5TZK3 123 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 STHQ8IWL8 128 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 C11orf72Q8NBR9 251 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 OVOL2Q9BRP0 275 aa5.34□□□□□ -1.55
CDKL5-201ENST00000379989 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-201ENST00000379989 MIFP14174 115 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 Q6YL49 198 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
CDKL5-201ENST00000379989 Q9H8V8 135 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 RP1L1Q8IWN7 2480 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-201ENST00000379989 IGHV3-49A0A0A0MS15 119 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 H3BUX3 64 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 TENM4Q6N022 2769 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 DEFB1P60022 68 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 DAD1P61803 113 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 CLEC19AQ6UXS0 136 aa5.33□□□□□ -1.56
CDKL5-201ENST00000379989 MAP1BP46821 2468 aaKnown RBP5.33□□□□□ -1.56
CDKL5-201ENST00000379989 SLPIP03973 132 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 PKDREJQ9NTG1 2253 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 LECT2O14960 151 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 UBE2E2Q96LR5 201 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 HIVEP3Q5T1R4 2406 aa5.32□□□□□ -1.56
CDKL5-201ENST00000379989 IGHV4-38-2P0DP08 117 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 TM2D3Q9BRN9 247 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 IGHV4-31P0DP07 118 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 C11orf45Q8TAV5 145 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 SMIM11BQ8TCY0 68 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 UBL5Q9BZL1 73 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 MED13LQ71F56 2210 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 CFAP46Q8IYW2 2715 aa5.31□□□□□ -1.56
CDKL5-201ENST00000379989 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-201ENST00000379989 G3V318 75 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 CRPP02741 224 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 PF4P02776 101 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 CMC4P56277 68 aaPredicted RBP5.3□□□□□ -1.56
CDKL5-201ENST00000379989 Q9UF83 564 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 CEP295Q9C0D2 2601 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 ORMDL1Q9P0S3 153 aa5.3□□□□□ -1.56
CDKL5-201ENST00000379989 IGKV2-28A0A075B6P5 120 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 IGKV2D-28P01615 120 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 SPTA1P02549 2419 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 PIEZO2Q9H5I5 2752 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 H0YGX0 51 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 Q6ZTI0 123 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 IGLV5-45A0A087WSX0 123 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 ROS1P08922 2347 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 VPS13CQ709C8 3753 aa5.29□□□□□ -1.56
CDKL5-201ENST00000379989 DEFB112Q30KQ8 113 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 BRD3OSQ6XYD6 125 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 Q6ZTC4 211 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 F6UB75 175 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 RPL36AP83881 106 aaKnown RBP5.28□□□□□ -1.56
CDKL5-201ENST00000379989 Q6ZRP5 223 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 RPL36ALQ969Q0 106 aaKnown RBP5.28□□□□□ -1.56
CDKL5-201ENST00000379989 CACNA1BQ00975 2339 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 IGF2RP11717 2491 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 LINC01547P58512 204 aaPredicted RBP5.28□□□□□ -1.56
CDKL5-201ENST00000379989 COX6A2Q02221 97 aa5.28□□□□□ -1.56
CDKL5-201ENST00000379989 TPRP12270 2363 aaKnown RBP5.27□□□□□ -1.57
CDKL5-201ENST00000379989 SORL1Q92673 2214 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 A8MTW9 85 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 IGHV3-38A0A0C4DH36 116 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 LINC00467Q9BRT7 94 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 DOPEY1Q5JWR5 2465 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 A8MU10 97 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 Q1T7F1 81 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 Q8N3U1 123 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 RHPN1-AS1Q9BWJ2 59 aa5.27□□□□□ -1.57
CDKL5-201ENST00000379989 J3QKU1 62 aa5.26□□□□□ -1.57
CDKL5-201ENST00000379989 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
CDKL5-201ENST00000379989 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
CDKL5-201ENST00000379989 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
CDKL5-201ENST00000379989 FUSP35637 526 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDKL5-201ENST00000379989 SVEP1Q4LDE5 3571 aa5.26□□□□□ -1.57
CDKL5-201ENST00000379989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.25□□□□□ -1.57
CDKL5-201ENST00000379989 KLLNB2CW77 178 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 CHCHD7Q9BUK0 85 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 LY6EQ16553 131 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 NREPQ16612 68 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 C11orf68Q9H3H3 251 aaKnown RBP5.25□□□□□ -1.57
CDKL5-201ENST00000379989 SND1-IT1Q9HBX3 110 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 ADGRG4Q8IZF6 3080 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 PKD1L2Q7Z442 2459 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms