RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 HIGD2AQ9BW72 106 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 ADAMTS20P59510 1910 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 TIMM17BO60830 172 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 UBE2D1P51668 147 aa9.9□□□□□ -0.82
C9orf47-203ENST00000375851 FLNBO75369 2602 aaKnown RBP9.9□□□□□ -0.82
C9orf47-203ENST00000375851 NDUFB1O75438 58 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 LELP1Q5T871 98 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
C9orf47-203ENST00000375851 LINC00643Q86TS7 51 aa9.88□□□□□ -0.83
C9orf47-203ENST00000375851 SLPIP03973 132 aa9.88□□□□□ -0.83
C9orf47-203ENST00000375851 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
C9orf47-203ENST00000375851 C1orf158Q8N1D5 194 aa9.88□□□□□ -0.83
C9orf47-203ENST00000375851 CLUHP3Q96NS8 147 aa9.88□□□□□ -0.83
C9orf47-203ENST00000375851 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
C9orf47-203ENST00000375851 AGRNO00468 2067 aa9.87□□□□□ -0.83
C9orf47-203ENST00000375851 POM121L12Q8N7R1 296 aa9.86□□□□□ -0.83
C9orf47-203ENST00000375851 COL4A2P08572 1712 aa9.86□□□□□ -0.83
C9orf47-203ENST00000375851 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
C9orf47-203ENST00000375851 PCNTO95613 3336 aa9.85□□□□□ -0.83
C9orf47-203ENST00000375851 PRB2P02812 416 aaPredicted RBP9.85□□□□□ -0.83
C9orf47-203ENST00000375851 RNF183Q96D59 192 aa9.85□□□□□ -0.83
C9orf47-203ENST00000375851 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.84□□□□□ -0.83
C9orf47-203ENST00000375851 A0A096LNJ9 63 aa9.84□□□□□ -0.83
C9orf47-203ENST00000375851 B9D2Q9BPU9 175 aa9.83□□□□□ -0.84
C9orf47-203ENST00000375851 C16orf95Q9H693 158 aa9.82□□□□□ -0.84
C9orf47-203ENST00000375851 SS18L2Q9UHA2 77 aa9.82□□□□□ -0.84
C9orf47-203ENST00000375851 A0A096LNI7 61 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 MP68P56378 58 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
C9orf47-203ENST00000375851 FAM19A1Q7Z5A9 133 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 MT-ATP8P03928 68 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 A0A087WZ39 114 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
C9orf47-203ENST00000375851 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
C9orf47-203ENST00000375851 IGLV4-69A0A075B6H9 119 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 A0A0J9YWU9 116 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 BPY2O14599 106 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 LST1O00453 97 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 Q8IZM0 81 aa9.8□□□□□ -0.84
C9orf47-203ENST00000375851 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 Q6ZQY7 126 aa9.79□□□□□ -0.84
C9orf47-203ENST00000375851 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
C9orf47-203ENST00000375851 FHL2Q14192 279 aa9.78□□□□□ -0.84
C9orf47-203ENST00000375851 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
C9orf47-203ENST00000375851 CYSRT1A8MQ03 144 aa9.78□□□□□ -0.84
C9orf47-203ENST00000375851 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 RETNQ9HD89 108 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 H0Y9J4 135 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 Q6ZSN1 163 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 TMEM258P61165 79 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 SMIM20Q8N5G0 67 aa9.77□□□□□ -0.85
C9orf47-203ENST00000375851 TSPEAR-AS2P59090 65 aa9.76□□□□□ -0.85
C9orf47-203ENST00000375851 UPK3BQ9BT76 320 aa9.76□□□□□ -0.85
C9orf47-203ENST00000375851 M0R378 163 aa9.76□□□□□ -0.85
C9orf47-203ENST00000375851 AMELXQ99217 191 aa9.76□□□□□ -0.85
C9orf47-203ENST00000375851 F8P00451 2351 aa9.76□□□□□ -0.85
C9orf47-203ENST00000375851 COX6A2Q02221 97 aa9.75□□□□□ -0.85
C9orf47-203ENST00000375851 COX17Q14061 63 aa9.75□□□□□ -0.85
C9orf47-203ENST00000375851 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
C9orf47-203ENST00000375851 CHD7Q9P2D1 2997 aa9.75□□□□□ -0.85
C9orf47-203ENST00000375851 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
C9orf47-203ENST00000375851 CCKP06307 115 aa9.73□□□□□ -0.85
C9orf47-203ENST00000375851 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
C9orf47-203ENST00000375851 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
C9orf47-203ENST00000375851 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
C9orf47-203ENST00000375851 MUC4Q99102 2169 aa9.72□□□□□ -0.85
C9orf47-203ENST00000375851 M0R2N4 97 aa9.72□□□□□ -0.85
C9orf47-203ENST00000375851 Q6ZTC4 211 aa9.72□□□□□ -0.85
C9orf47-203ENST00000375851 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
C9orf47-203ENST00000375851 Q8N2B8 174 aa9.72□□□□□ -0.85
C9orf47-203ENST00000375851 HECTD1Q9ULT8 2610 aa9.71□□□□□ -0.85
C9orf47-203ENST00000375851 ENHOQ6UWT2 76 aa9.71□□□□□ -0.85
C9orf47-203ENST00000375851 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
C9orf47-203ENST00000375851 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
C9orf47-203ENST00000375851 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.86
C9orf47-203ENST00000375851 ADAMTSL4-AS1Q5T5F5 129 aa9.7□□□□□ -0.86
C9orf47-203ENST00000375851 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
C9orf47-203ENST00000375851 LRCOL1A6NCL2 159 aa9.69□□□□□ -0.86
C9orf47-203ENST00000375851 RPL37AP8A6NKH3 93 aa9.69□□□□□ -0.86
C9orf47-203ENST00000375851 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
C9orf47-203ENST00000375851 C20orf197Q8N268 126 aa9.69□□□□□ -0.86
C9orf47-203ENST00000375851 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
C9orf47-203ENST00000375851 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
C9orf47-203ENST00000375851 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
C9orf47-203ENST00000375851 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
C9orf47-203ENST00000375851 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
C9orf47-203ENST00000375851 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
C9orf47-203ENST00000375851 PTPRBP23467 1997 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms