RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.44
VARS-215ENST00000375663 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
VARS-215ENST00000375663 KLK12Q9UKR0 248 aa12.26□□□□□ -0.45
VARS-215ENST00000375663 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
VARS-215ENST00000375663 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
VARS-215ENST00000375663 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 IGKV2D-24A0A075B6R9 120 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 FRYLO94915 3013 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 DEFB105AQ8NG35 78 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 TRBV6-4A0A1B0GX49 114 aa12.25□□□□□ -0.45
VARS-215ENST00000375663 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 HECTD1Q9ULT8 2610 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 C9orf66Q5T8R8 295 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 FAM222AQ5U5X8 452 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 NDUFA7O95182 113 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 AMELXQ99217 191 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
VARS-215ENST00000375663 BRI3O95415 125 aa12.23□□□□□ -0.45
VARS-215ENST00000375663 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
VARS-215ENST00000375663 CDIP1Q9H305 208 aa12.23□□□□□ -0.45
VARS-215ENST00000375663 RPL18AQ02543 176 aaKnown RBP12.23□□□□□ -0.45
VARS-215ENST00000375663 Q6Q795 121 aa12.22□□□□□ -0.45
VARS-215ENST00000375663 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
VARS-215ENST00000375663 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
VARS-215ENST00000375663 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
VARS-215ENST00000375663 DIRC1Q969H9 104 aa12.21□□□□□ -0.45
VARS-215ENST00000375663 CDC42SE2Q9NRR3 84 aa12.21□□□□□ -0.45
VARS-215ENST00000375663 WDFY4Q6ZS81 3184 aa12.21□□□□□ -0.45
VARS-215ENST00000375663 LINC00315P59091 139 aa12.2□□□□□ -0.46
VARS-215ENST00000375663 SMCPP49901 116 aaPredicted RBP12.2□□□□□ -0.46
VARS-215ENST00000375663 PRO0461Q9UI25 63 aa12.2□□□□□ -0.46
VARS-215ENST00000375663 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
VARS-215ENST00000375663 SMIM11BQ8TCY0 68 aa12.2□□□□□ -0.46
VARS-215ENST00000375663 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
VARS-215ENST00000375663 REG3AQ06141 175 aa12.19□□□□□ -0.46
VARS-215ENST00000375663 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
VARS-215ENST00000375663 H3BQ85 93 aa12.18□□□□□ -0.46
VARS-215ENST00000375663 NREPQ16612 68 aa12.18□□□□□ -0.46
VARS-215ENST00000375663 COX6A2Q02221 97 aa12.18□□□□□ -0.46
VARS-215ENST00000375663 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
VARS-215ENST00000375663 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
VARS-215ENST00000375663 C6orf99Q4VX62 202 aa12.17□□□□□ -0.46
VARS-215ENST00000375663 ODF3L2Q3SX64 289 aa12.17□□□□□ -0.46
VARS-215ENST00000375663 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
VARS-215ENST00000375663 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
VARS-215ENST00000375663 PDE6GP18545 87 aa12.16□□□□□ -0.46
VARS-215ENST00000375663 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
VARS-215ENST00000375663 CCL18P55774 89 aa12.16□□□□□ -0.46
VARS-215ENST00000375663 Q6ZSN1 163 aa12.16□□□□□ -0.46
VARS-215ENST00000375663 ANKRD17O75179 2603 aaKnown RBP12.15□□□□□ -0.46
VARS-215ENST00000375663 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.46
VARS-215ENST00000375663 ETDCA0A1B0GVM5 59 aa12.14□□□□□ -0.47
VARS-215ENST00000375663 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
VARS-215ENST00000375663 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
VARS-215ENST00000375663 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
VARS-215ENST00000375663 LRRC75A-AS1Q8N1F1 130 aa12.13□□□□□ -0.47
VARS-215ENST00000375663 COX7BP24311 80 aa12.13□□□□□ -0.47
VARS-215ENST00000375663 TMEM258P61165 79 aa12.13□□□□□ -0.47
VARS-215ENST00000375663 ATP5EP2Q5VTU8 51 aa12.12□□□□□ -0.47
VARS-215ENST00000375663 FAM19A4Q96LR4 140 aa12.12□□□□□ -0.47
VARS-215ENST00000375663 COX7CP15954 63 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 BBC3Q96PG8 261 aaPredicted RBP12.11□□□□□ -0.47
VARS-215ENST00000375663 M0QXV9 152 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 UBE2BP63146 152 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 SERP2Q8N6R1 65 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 FRYQ5TBA9 3013 aa12.11□□□□□ -0.47
VARS-215ENST00000375663 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
VARS-215ENST00000375663 RMI2Q96E14 147 aa12.1□□□□□ -0.47
VARS-215ENST00000375663 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
VARS-215ENST00000375663 C1orf158Q8N1D5 194 aa12.1□□□□□ -0.47
VARS-215ENST00000375663 MUC4Q99102 2169 aa12.09□□□□□ -0.47
VARS-215ENST00000375663 LYRM9A8MSI8 78 aa12.09□□□□□ -0.47
VARS-215ENST00000375663 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
VARS-215ENST00000375663 FREM2Q5SZK8 3169 aa12.09□□□□□ -0.47
VARS-215ENST00000375663 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
VARS-215ENST00000375663 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
VARS-215ENST00000375663 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
VARS-215ENST00000375663 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
VARS-215ENST00000375663 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
VARS-215ENST00000375663 LINC00526Q96FQ7 95 aa12.07□□□□□ -0.48
VARS-215ENST00000375663 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
VARS-215ENST00000375663 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
VARS-215ENST00000375663 COL6A3P12111 3177 aa12.06□□□□□ -0.48
VARS-215ENST00000375663 SCXQ7RTU7 201 aa12.06□□□□□ -0.48
VARS-215ENST00000375663 IGLV4-60A0A075B6I1 120 aa12.05□□□□□ -0.48
VARS-215ENST00000375663 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
VARS-215ENST00000375663 Q6ZQY7 126 aa12.05□□□□□ -0.48
VARS-215ENST00000375663 DSPP15924 2871 aaKnown RBP12.04□□□□□ -0.48
VARS-215ENST00000375663 Q6JHZ5 121 aa12.03□□□□□ -0.48
VARS-215ENST00000375663 Q8IZM0 81 aa12.03□□□□□ -0.48
VARS-215ENST00000375663 A0A087WZ39 114 aa12.03□□□□□ -0.48
VARS-215ENST00000375663 A0A087WYN8 130 aa12.02□□□□□ -0.48
VARS-215ENST00000375663 FAM236DA0A1B0GTK5 79 aa12.01□□□□□ -0.49
VARS-215ENST00000375663 BPY2O14599 106 aa12.01□□□□□ -0.49
VARS-215ENST00000375663 FAM236CP0DP71 79 aa12.01□□□□□ -0.49
VARS-215ENST00000375663 Q9UF83 564 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms