RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ATXN8Q156A1 80 aa6.29□□□□□ -1.4
UBR4-201ENST00000375218 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGKV1D-33P01593 117 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGKV1-33P01594 117 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
UBR4-201ENST00000375218 AKAP6Q13023 2319 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 MALRD1Q5VYJ5 2156 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGHV3-74A0A0B4J1X5 117 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 PRB1P04280 392 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGHV3-16A0A0C4DH30 117 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGHV3-43A0A0B4J1X8 118 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 OCR1Q9BZK8 76 aa6.28□□□□□ -1.4
UBR4-201ENST00000375218 A0A087WVE0 104 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 K7ERS5 55 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
UBR4-201ENST00000375218 LINC00574Q9H8X3 128 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 CRIP2P52943 208 aaPredicted RBP6.27□□□□□ -1.41
UBR4-201ENST00000375218 PRB3Q04118 309 aaPredicted RBP6.27□□□□□ -1.41
UBR4-201ENST00000375218 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 IGHV1-46P01743 117 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 LYZL1Q6UWQ5 148 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 LYPD2Q6UXB3 125 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
UBR4-201ENST00000375218 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 TRBV6-6A0A0A6YYG2 114 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 PLGLAQ15195 96 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 SMCR5Q8TEV8 140 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 FLNBO75369 2602 aaKnown RBP6.26□□□□□ -1.41
UBR4-201ENST00000375218 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 ABCA1O95477 2261 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 SLURP1P55000 103 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
UBR4-201ENST00000375218 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
UBR4-201ENST00000375218 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 A8MWP4 228 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 DYNAPQ8N1N2 210 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 MED13LQ71F56 2210 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 PMS2P5A8MQ11 134 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 IGLV2-23P01705 113 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 CSNK1G2-AS1Q8NCQ2 148 aa6.25□□□□□ -1.41
UBR4-201ENST00000375218 IGHV4OR15-8A0A075B7B6 117 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 LYNX1G3V0Z9 82 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 LYNX1P0DP58 116 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 U3KQK5 164 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 HCP5Q6MZN7 132 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 SRRM5B3KS81 715 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 WNK2Q9Y3S1 2297 aa6.24□□□□□ -1.41
UBR4-201ENST00000375218 GAFA1Q96PS6 74 aa6.23□□□□□ -1.41
UBR4-201ENST00000375218 LEAP2Q969E1 77 aa6.23□□□□□ -1.41
UBR4-201ENST00000375218 Q1RN00 199 aa6.23□□□□□ -1.41
UBR4-201ENST00000375218 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 PRKDCP78527 4128 aaKnown RBP6.22□□□□□ -1.41
UBR4-201ENST00000375218 IGLV1-51P01701 117 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 LINC01560Q8TB33 94 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 LY6G6DO95868 133 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 MIFP14174 115 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
UBR4-201ENST00000375218 NAV2Q8IVL1 2488 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 hDV103S1A0JD37 113 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
UBR4-201ENST00000375218 A0A096LNT2 108 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 PTPN13Q12923 2485 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 FAM168AQ92567 244 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 DPM3Q9P2X0 92 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 TIMM9Q9Y5J7 89 aa6.21□□□□□ -1.42
UBR4-201ENST00000375218 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
UBR4-201ENST00000375218 IGHV3-49A0A0A0MS15 119 aa6.2□□□□□ -1.42
UBR4-201ENST00000375218 M0R3E3 92 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 DEFB121Q5J5C9 76 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 SUMO4Q6EEV6 95 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 IGHV3-11P01762 117 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 Q6ZSN1 163 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 VMO1Q7Z5L0 202 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 H7C2G1 150 aa6.19□□□□□ -1.42
UBR4-201ENST00000375218 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 A0A087WW49 117 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 D6R8Y8 96 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 FSHBP01225 129 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 ROMO1P60602 79 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 HECTD1Q9ULT8 2610 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 C17orf98A8MV24 154 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms