RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 CYSRT1A8MQ03 144 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 I3L3M4 83 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 GFRA4Q9GZZ7 299 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 CNOT1A5YKK6 2376 aaKnown RBP5.45□□□□□ -1.54
USP48-203ENST00000374732 EPG5Q9HCE0 2579 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 RPL27AP46776 148 aaKnown RBP5.45□□□□□ -1.54
USP48-203ENST00000374732 KIF25-AS1Q9Y6Z4 181 aa5.45□□□□□ -1.54
USP48-203ENST00000374732 TNCP24821 2201 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 TRBV10-3A0A0K0K1G6 114 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 LINC01560Q8TB33 94 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 IGSF10Q6WRI0 2623 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 IGKV1D-37A0A075B6S9 117 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 IGHV1-3A0A0C4DH29 117 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 C11orf86A6NJI1 115 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 LIMD2Q9BT23 127 aa5.44□□□□□ -1.54
USP48-203ENST00000374732 PTPRZ1P23471 2315 aaPredicted RBP5.44□□□□□ -1.54
USP48-203ENST00000374732 PLCE1Q9P212 2302 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 TRBV6-8A0A0A6YYG3 113 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 NDPQ00604 133 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 S4R3C0 116 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 AKAP13Q12802 2813 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 DSPP15924 2871 aaKnown RBP5.43□□□□□ -1.54
USP48-203ENST00000374732 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 C10orf113Q5VZT2 155 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 C14orf132Q9NPU4 83 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
USP48-203ENST00000374732 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
USP48-203ENST00000374732 LY6G6DO95868 133 aa5.42□□□□□ -1.54
USP48-203ENST00000374732 TRGV3P03979 118 aa5.42□□□□□ -1.54
USP48-203ENST00000374732 PRRC2CQ9Y520 2896 aaKnown RBP5.42□□□□□ -1.54
USP48-203ENST00000374732 F8W735 103 aaPredicted RBP5.42□□□□□ -1.54
USP48-203ENST00000374732 LYZL1Q6UWQ5 148 aa5.42□□□□□ -1.54
USP48-203ENST00000374732 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
USP48-203ENST00000374732 U3KQK5 164 aa5.42□□□□□ -1.54
USP48-203ENST00000374732 IGHV4-61A0A0C4DH41 118 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 IGHV4-59P01825 116 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 NPBQ8NG41 125 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 CDC42SE2Q9NRR3 84 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 IGHV4-28A0A0C4DH34 117 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 ZFP36P26651 326 aaKnown RBP5.41□□□□□ -1.54
USP48-203ENST00000374732 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 MYO18BQ8IUG5 2567 aa5.41□□□□□ -1.54
USP48-203ENST00000374732 ODF3BA8MYP8 253 aa5.4□□□□□ -1.54
USP48-203ENST00000374732 COX7A1P24310 79 aa5.4□□□□□ -1.54
USP48-203ENST00000374732 DPM3Q9P2X0 92 aa5.4□□□□□ -1.54
USP48-203ENST00000374732 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
USP48-203ENST00000374732 ASPMQ8IZT6 3477 aa5.4□□□□□ -1.54
USP48-203ENST00000374732 LYNX1G3V0Z9 82 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 IGHV4-30-4P0DP06 118 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 LYNX1P0DP58 116 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 TMEM14CQ9P0S9 112 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 LUZP6Q538Z0 58 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 LINC00322Q6ZN03 302 aaPredicted RBP5.4□□□□□ -1.55
USP48-203ENST00000374732 ZFAND2AQ8N6M9 145 aa5.4□□□□□ -1.55
USP48-203ENST00000374732 MRPL36Q9P0J6 103 aaKnown RBP5.4□□□□□ -1.55
USP48-203ENST00000374732 I3L2K1 104 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 NREPQ16612 68 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 ERC2-IT1O76042 136 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 MGAQ8IWI9 3026 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 ANKRD11Q6UB99 2663 aaPredicted RBP5.39□□□□□ -1.55
USP48-203ENST00000374732 ICE1Q9Y2F5 2266 aa5.39□□□□□ -1.55
USP48-203ENST00000374732 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
USP48-203ENST00000374732 TRAV12-1A0A0B4J245 112 aa5.38□□□□□ -1.55
USP48-203ENST00000374732 TRAV21A0A0B4J279 112 aa5.38□□□□□ -1.55
USP48-203ENST00000374732 HCP5Q6MZN7 132 aa5.38□□□□□ -1.55
USP48-203ENST00000374732 TRBV6-1A0A0K0K1D8 114 aa5.38□□□□□ -1.55
USP48-203ENST00000374732 KLK9Q2XQG4 91 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 KLK9Q9UKQ9 250 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 BOD1L1Q8NFC6 3051 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 PTPRQQ9UMZ3 2332 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 PRB2P02812 416 aaPredicted RBP5.37□□□□□ -1.55
USP48-203ENST00000374732 ACACAQ13085 2346 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 APC2O95996 2303 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 SOCS3O14543 225 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 Q8N9P0 234 aaPredicted RBP5.37□□□□□ -1.55
USP48-203ENST00000374732 Q8NAQ8 132 aa5.37□□□□□ -1.55
USP48-203ENST00000374732 A8MWP4 228 aa5.36□□□□□ -1.55
USP48-203ENST00000374732 K7EIM0 57 aa5.36□□□□□ -1.55
USP48-203ENST00000374732 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
USP48-203ENST00000374732 RPL36ALQ969Q0 106 aaKnown RBP5.36□□□□□ -1.55
USP48-203ENST00000374732 ATRXP46100 2492 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 IGKV1-17P01599 117 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 IGLV11-55A0A075B6I3 123 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 IGHV1-69P01742 117 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 MALRD1Q5VYJ5 2156 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 ATMQ13315 3056 aa5.35□□□□□ -1.55
USP48-203ENST00000374732 H3BRN7 92 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 SORL1Q92673 2214 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms