RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 PPDPFLQ8WWR9 84 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 MT-ATP8P03928 68 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 HERVK_113P63121 156 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 DAZ2Q13117 558 aaKnown RBP12.08□□□□□ -0.48
RXRB-201ENST00000374680 CLPSL2Q6UWE3 100 aa12.08□□□□□ -0.48
RXRB-201ENST00000374680 DAZ4Q86SG3 579 aaKnown RBP12.08□□□□□ -0.48
RXRB-201ENST00000374680 DAZ3Q9NR90 486 aaKnown RBP12.08□□□□□ -0.48
RXRB-201ENST00000374680 IGLV4-60A0A075B6I1 120 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 TEX49A0A1B0GTD5 131 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 J3QKU1 62 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 TIRAPP58753 221 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 CDIP1Q9H305 208 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 FLNBO75369 2602 aaKnown RBP12.07□□□□□ -0.48
RXRB-201ENST00000374680 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
RXRB-201ENST00000374680 TEX29Q8N6K0 151 aa12.07□□□□□ -0.48
RXRB-201ENST00000374680 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
RXRB-201ENST00000374680 TMEM262E9PQX1 116 aa12.06□□□□□ -0.48
RXRB-201ENST00000374680 ATXN8Q156A1 80 aa12.06□□□□□ -0.48
RXRB-201ENST00000374680 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
RXRB-201ENST00000374680 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
RXRB-201ENST00000374680 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
RXRB-201ENST00000374680 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 A0A1B0GV72 72 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 SPANXDQ9BXN6 97 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 SPANXCQ9NY87 97 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 NDUFA1O15239 70 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 ATP6V0E2Q8NHE4 81 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 LINC00308Q8TCZ7 52 aa12.05□□□□□ -0.48
RXRB-201ENST00000374680 XGP55808 180 aa12.04□□□□□ -0.48
RXRB-201ENST00000374680 CSNK1G2-AS1Q8NCQ2 148 aa12.04□□□□□ -0.48
RXRB-201ENST00000374680 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
RXRB-201ENST00000374680 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
RXRB-201ENST00000374680 NSD1Q96L73 2696 aaPredicted RBP12.03□□□□□ -0.48
RXRB-201ENST00000374680 HILS1P60008 231 aa12.03□□□□□ -0.48
RXRB-201ENST00000374680 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
RXRB-201ENST00000374680 FHL2Q14192 279 aa12.02□□□□□ -0.48
RXRB-201ENST00000374680 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
RXRB-201ENST00000374680 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.49
RXRB-201ENST00000374680 COX6CP09669 75 aa12.02□□□□□ -0.49
RXRB-201ENST00000374680 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
RXRB-201ENST00000374680 C16orf95Q9H693 158 aa12.01□□□□□ -0.49
RXRB-201ENST00000374680 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
RXRB-201ENST00000374680 PFN2P35080 140 aa12□□□□□ -0.49
RXRB-201ENST00000374680 LY6G6DO95868 133 aa12□□□□□ -0.49
RXRB-201ENST00000374680 F5H768 121 aa12□□□□□ -0.49
RXRB-201ENST00000374680 GYPEP15421 78 aa12□□□□□ -0.49
RXRB-201ENST00000374680 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
RXRB-201ENST00000374680 H7C423 109 aa11.99□□□□□ -0.49
RXRB-201ENST00000374680 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
RXRB-201ENST00000374680 XCL1P47992 114 aa11.98□□□□□ -0.49
RXRB-201ENST00000374680 LINC00158P58513 81 aa11.98□□□□□ -0.49
RXRB-201ENST00000374680 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
RXRB-201ENST00000374680 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
RXRB-201ENST00000374680 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
RXRB-201ENST00000374680 Q8N3U1 123 aa11.97□□□□□ -0.49
RXRB-201ENST00000374680 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
RXRB-201ENST00000374680 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
RXRB-201ENST00000374680 CKS1BP61024 79 aa11.96□□□□□ -0.5
RXRB-201ENST00000374680 CSDC2Q9Y534 153 aaKnown RBP11.96□□□□□ -0.5
RXRB-201ENST00000374680 IFITM1P13164 125 aa11.95□□□□□ -0.5
RXRB-201ENST00000374680 HTN3P15516 51 aa11.95□□□□□ -0.5
RXRB-201ENST00000374680 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
RXRB-201ENST00000374680 OVOL2Q9BRP0 275 aa11.95□□□□□ -0.5
RXRB-201ENST00000374680 IGLV10-54A0A075B6I4 117 aa11.94□□□□□ -0.5
RXRB-201ENST00000374680 COX7B2Q8TF08 81 aa11.94□□□□□ -0.5
RXRB-201ENST00000374680 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
RXRB-201ENST00000374680 TIMM17BO60830 172 aa11.93□□□□□ -0.5
RXRB-201ENST00000374680 UBE2WQ96B02 151 aa11.93□□□□□ -0.5
RXRB-201ENST00000374680 LST1O00453 97 aa11.91□□□□□ -0.5
RXRB-201ENST00000374680 Q9HAA7 133 aa11.91□□□□□ -0.5
RXRB-201ENST00000374680 PKD1L1Q8TDX9 2849 aa11.91□□□□□ -0.5
RXRB-201ENST00000374680 TRAV8-4A0A0B4J246 113 aa11.9□□□□□ -0.51
RXRB-201ENST00000374680 C6orf226Q5I0X4 101 aa11.9□□□□□ -0.51
RXRB-201ENST00000374680 X6R8D5 127 aa11.9□□□□□ -0.51
RXRB-201ENST00000374680 F8P00451 2351 aa11.89□□□□□ -0.51
RXRB-201ENST00000374680 IGHV3OR16-9A0A0B4J2B5 98 aa11.89□□□□□ -0.51
RXRB-201ENST00000374680 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
RXRB-201ENST00000374680 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
RXRB-201ENST00000374680 FAM218AQ96MZ4 157 aa11.88□□□□□ -0.51
RXRB-201ENST00000374680 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
RXRB-201ENST00000374680 TTC32Q5I0X7 151 aa11.88□□□□□ -0.51
RXRB-201ENST00000374680 PAX4O43316 350 aa11.87□□□□□ -0.51
RXRB-201ENST00000374680 LINC00337Q8N6G1 96 aa11.87□□□□□ -0.51
RXRB-201ENST00000374680 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
RXRB-201ENST00000374680 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
RXRB-201ENST00000374680 ATP5G1P05496 136 aa11.86□□□□□ -0.51
RXRB-201ENST00000374680 HERV-K104P63124 156 aa11.86□□□□□ -0.51
RXRB-201ENST00000374680 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
RXRB-201ENST00000374680 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
RXRB-201ENST00000374680 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
RXRB-201ENST00000374680 CCL18P55774 89 aa11.85□□□□□ -0.51
RXRB-201ENST00000374680 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
RXRB-201ENST00000374680 COX7A2LO14548 114 aa11.84□□□□□ -0.51
RXRB-201ENST00000374680 CRPP02741 224 aa11.84□□□□□ -0.51
RXRB-201ENST00000374680 C15orf53Q8NAA6 179 aa11.84□□□□□ -0.51
RXRB-201ENST00000374680 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms