RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 Q6ZSN1 163 aa12.14□□□□□ -0.47
PHF1-202ENST00000374516 ZNF415Q09FC8 603 aa12.13□□□□□ -0.47
PHF1-202ENST00000374516 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
PHF1-202ENST00000374516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
PHF1-202ENST00000374516 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
PHF1-202ENST00000374516 C1orf158Q8N1D5 194 aa12.12□□□□□ -0.47
PHF1-202ENST00000374516 DAND5Q8N907 189 aa12.12□□□□□ -0.47
PHF1-202ENST00000374516 ATRQ13535 2644 aa12.12□□□□□ -0.47
PHF1-202ENST00000374516 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
PHF1-202ENST00000374516 PF4P02776 101 aa12.1□□□□□ -0.47
PHF1-202ENST00000374516 LINC00467Q9BRT7 94 aa12.1□□□□□ -0.47
PHF1-202ENST00000374516 RPL35AP18077 110 aaKnown RBP12.1□□□□□ -0.47
PHF1-202ENST00000374516 TMEM101Q96IK0 257 aa12.09□□□□□ -0.47
PHF1-202ENST00000374516 NDUFA1O15239 70 aa12.09□□□□□ -0.47
PHF1-202ENST00000374516 TIRAPP58753 221 aa12.08□□□□□ -0.48
PHF1-202ENST00000374516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.08□□□□□ -0.48
PHF1-202ENST00000374516 C19orf73Q9NVV2 129 aa12.08□□□□□ -0.48
PHF1-202ENST00000374516 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
PHF1-202ENST00000374516 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
PHF1-202ENST00000374516 GIG44P09565 113 aaPredicted RBP12.08□□□□□ -0.48
PHF1-202ENST00000374516 CIRBPQ14011 172 aaKnown RBP12.08□□□□□ -0.48
PHF1-202ENST00000374516 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
PHF1-202ENST00000374516 IGLV5-45A0A087WSX0 123 aa12.07□□□□□ -0.48
PHF1-202ENST00000374516 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
PHF1-202ENST00000374516 SPATA3Q8NHX4 192 aa12.06□□□□□ -0.48
PHF1-202ENST00000374516 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
PHF1-202ENST00000374516 TEP1Q99973 2627 aaKnown RBP12.06□□□□□ -0.48
PHF1-202ENST00000374516 TRBV7-7A0A0K0K1E9 115 aa12.06□□□□□ -0.48
PHF1-202ENST00000374516 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
PHF1-202ENST00000374516 COX6A2Q02221 97 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 LINC00482Q8N8I6 264 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
PHF1-202ENST00000374516 MEIG1Q5JSS6 88 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 NBEAL2Q6ZNJ1 2754 aa12.05□□□□□ -0.48
PHF1-202ENST00000374516 F8P00451 2351 aa12.04□□□□□ -0.48
PHF1-202ENST00000374516 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
PHF1-202ENST00000374516 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
PHF1-202ENST00000374516 Q9H8V8 135 aa12.04□□□□□ -0.48
PHF1-202ENST00000374516 ACYP1P07311 99 aa12.03□□□□□ -0.48
PHF1-202ENST00000374516 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
PHF1-202ENST00000374516 COX7A2LO14548 114 aa12.03□□□□□ -0.48
PHF1-202ENST00000374516 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
PHF1-202ENST00000374516 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
PHF1-202ENST00000374516 A0A0U1RRA0 63 aa12.02□□□□□ -0.49
PHF1-202ENST00000374516 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
PHF1-202ENST00000374516 Q6ZTI0 123 aa12.02□□□□□ -0.49
PHF1-202ENST00000374516 FAM110AQ9BQ89 295 aa12.02□□□□□ -0.49
PHF1-202ENST00000374516 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PHF1-202ENST00000374516 RS1O15537 224 aa12□□□□□ -0.49
PHF1-202ENST00000374516 HERVK_113P63121 156 aa12□□□□□ -0.49
PHF1-202ENST00000374516 SMIM20Q8N5G0 67 aa12□□□□□ -0.49
PHF1-202ENST00000374516 NOP10Q9NPE3 64 aaKnown RBP12□□□□□ -0.49
PHF1-202ENST00000374516 SOSTDC1Q6X4U4 206 aa12□□□□□ -0.49
PHF1-202ENST00000374516 IL17DQ8TAD2 202 aa12□□□□□ -0.49
PHF1-202ENST00000374516 IMUPQ9GZP8 106 aa12□□□□□ -0.49
PHF1-202ENST00000374516 BAHCC1Q9P281 2608 aa11.99□□□□□ -0.49
PHF1-202ENST00000374516 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
PHF1-202ENST00000374516 COPS9Q8WXC6 57 aa11.98□□□□□ -0.49
PHF1-202ENST00000374516 SMIM1B2RUZ4 78 aa11.97□□□□□ -0.49
PHF1-202ENST00000374516 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
PHF1-202ENST00000374516 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
PHF1-202ENST00000374516 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
PHF1-202ENST00000374516 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
PHF1-202ENST00000374516 TRACP01848 142 aa11.96□□□□□ -0.49
PHF1-202ENST00000374516 BAALC-AS2P0C853 105 aa11.96□□□□□ -0.49
PHF1-202ENST00000374516 FAM236AA0A1B0GUQ0 79 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 FAM236BA0A1B0GV22 79 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 PLAC8L1A1L4L8 177 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 FAM19A3Q7Z5A8 133 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 LINC00643Q86TS7 51 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 HERV-K104P63124 156 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
PHF1-202ENST00000374516 TRAV13-1A0A0B4J241 112 aa11.94□□□□□ -0.5
PHF1-202ENST00000374516 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
PHF1-202ENST00000374516 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
PHF1-202ENST00000374516 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
PHF1-202ENST00000374516 TMEM126AQ9H061 195 aa11.93□□□□□ -0.5
PHF1-202ENST00000374516 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
PHF1-202ENST00000374516 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
PHF1-202ENST00000374516 C3orf56Q8N813 242 aa11.92□□□□□ -0.5
PHF1-202ENST00000374516 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
PHF1-202ENST00000374516 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
PHF1-202ENST00000374516 F5H768 121 aa11.91□□□□□ -0.5
PHF1-202ENST00000374516 NTM-AS1Q6ZSK4 140 aa11.9□□□□□ -0.5
PHF1-202ENST00000374516 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
PHF1-202ENST00000374516 K7EQD1 137 aa11.89□□□□□ -0.51
PHF1-202ENST00000374516 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
PHF1-202ENST00000374516 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
PHF1-202ENST00000374516 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
PHF1-202ENST00000374516 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
PHF1-202ENST00000374516 FBN1P35555 2871 aaKnown RBP11.87□□□□□ -0.51
PHF1-202ENST00000374516 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
PHF1-202ENST00000374516 OVOL2Q9BRP0 275 aa11.87□□□□□ -0.51
PHF1-202ENST00000374516 Q9HAA7 133 aa11.87□□□□□ -0.51
PHF1-202ENST00000374516 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
PHF1-202ENST00000374516 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
PHF1-202ENST00000374516 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms