RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TEN1Q86WV5 123 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 MIR7-3HGQ8N6C7 128 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 IGHV3-30P01768 117 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 IGHV3-33P01772 117 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 IGHV3-30-5P0DP03 117 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 FAM222AQ5U5X8 452 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 LAMTOR3Q9UHA4 124 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 HIVEP1P15822 2718 aa5.66□□□□□ -1.5
HERC4-202ENST00000373700 RBMY1FQ15415 496 aaKnown RBP5.66□□□□□ -1.5
HERC4-202ENST00000373700 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
HERC4-202ENST00000373700 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
HERC4-202ENST00000373700 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
HERC4-202ENST00000373700 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
HERC4-202ENST00000373700 Q9HAA7 133 aa5.66□□□□□ -1.5
HERC4-202ENST00000373700 SPANXB1Q9NS25 103 aaPredicted RBP5.66□□□□□ -1.5
HERC4-202ENST00000373700 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
HERC4-202ENST00000373700 A0A096LNT2 108 aa5.65□□□□□ -1.5
HERC4-202ENST00000373700 C15orf53Q8NAA6 179 aa5.65□□□□□ -1.5
HERC4-202ENST00000373700 KIF25-AS1Q9Y6Z4 181 aa5.65□□□□□ -1.5
HERC4-202ENST00000373700 NSD1Q96L73 2696 aaPredicted RBP5.65□□□□□ -1.51
HERC4-202ENST00000373700 EDA2RQ9HAV5 297 aa5.65□□□□□ -1.51
HERC4-202ENST00000373700 TEX49A0A1B0GTD5 131 aa5.65□□□□□ -1.51
HERC4-202ENST00000373700 POM121L12Q8N7R1 296 aa5.65□□□□□ -1.51
HERC4-202ENST00000373700 KLK12Q9UKR0 248 aa5.65□□□□□ -1.51
HERC4-202ENST00000373700 TRBV10-1A0A0K0K1A3 114 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 ZNF561-AS1K7EIQ3 104 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 ATP5G1P05496 136 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 LINC00315P59091 139 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 MIAQ16674 131 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 C1orf158Q8N1D5 194 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 TRIAP1O43715 76 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 IFITM1P13164 125 aa5.64□□□□□ -1.51
HERC4-202ENST00000373700 LINC00269Q8N2A0 174 aa5.63□□□□□ -1.51
HERC4-202ENST00000373700 TRAV13-2A0A0B4J235 113 aa5.63□□□□□ -1.51
HERC4-202ENST00000373700 UFSP1Q6NVU6 142 aa5.63□□□□□ -1.51
HERC4-202ENST00000373700 PRO0255Q9UI72 69 aa5.63□□□□□ -1.51
HERC4-202ENST00000373700 SPART-AS1P0CW21 52 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 RETNQ9HD89 108 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 RPL32P62910 135 aaKnown RBP5.62□□□□□ -1.51
HERC4-202ENST00000373700 HERV-K104P63124 156 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 COX7A2LO14548 114 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 COX6A2Q02221 97 aa5.62□□□□□ -1.51
HERC4-202ENST00000373700 LECT2O14960 151 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 PYGO1Q9Y3Y4 419 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 IGLV1-51P01701 117 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 KRTAP1-3Q8IUG1 177 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 UBE2DNLQ8IWF7 75 aa5.61□□□□□ -1.51
HERC4-202ENST00000373700 BRI3O95415 125 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 FSHBP01225 129 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 CRYBA4P53673 196 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 MRPL23Q16540 153 aaKnown RBP5.6□□□□□ -1.51
HERC4-202ENST00000373700 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 CHCHD7Q9BUK0 85 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 NCR3O14931 201 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 MRPS36P82909 103 aaKnown RBP5.6□□□□□ -1.51
HERC4-202ENST00000373700 A0A0B4J2C4 111 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 UBE2D1P51668 147 aa5.6□□□□□ -1.51
HERC4-202ENST00000373700 SLPIP03973 132 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 FAM19A4Q96LR4 140 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 IGHV4-28A0A0C4DH34 117 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 IGHV4-30-4P0DP06 118 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 CR1P17927 2039 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 TENM4Q6N022 2769 aa5.59□□□□□ -1.51
HERC4-202ENST00000373700 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 B5MCH6 92 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 INAFM2P0DMQ5 153 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 HIGD2BQ4VC39 106 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 TRBV6-4A0A1B0GX49 114 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 TIRAPP58753 221 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 HAMPP81172 84 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 CDC42SE2Q9NRR3 84 aa5.58□□□□□ -1.52
HERC4-202ENST00000373700 IGKV3D-7A0A0C4DH55 119 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 NDUFA1O15239 70 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 UBE2D3P61077 147 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 UBE2D2P62837 147 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 REG3AQ06141 175 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 Q8N2B8 174 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 CHCHD10Q8WYQ3 142 aaPredicted RBP5.57□□□□□ -1.52
HERC4-202ENST00000373700 XAGE1AQ9HD64 81 aa5.57□□□□□ -1.52
HERC4-202ENST00000373700 PSCAO43653 123 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 ZNF575Q86XF7 245 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 C11orf72Q8NBR9 251 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 DEFB105AQ8NG35 78 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 OVOL2Q9BRP0 275 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 C14orf132Q9NPU4 83 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 RPL18AQ02543 176 aaKnown RBP5.56□□□□□ -1.52
HERC4-202ENST00000373700 C1orf43Q9BWL3 253 aa5.56□□□□□ -1.52
HERC4-202ENST00000373700 SMIM1B2RUZ4 78 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms