RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
GTF3C5-204ENST00000372108 IGLV5-45A0A087WSX0 123 aa10.8□□□□□ -0.68
GTF3C5-204ENST00000372108 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
GTF3C5-204ENST00000372108 A0A0J9YWU9 116 aa10.79□□□□□ -0.68
GTF3C5-204ENST00000372108 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
GTF3C5-204ENST00000372108 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
GTF3C5-204ENST00000372108 TRAV8-3A0A0A6YYJ7 113 aa10.79□□□□□ -0.68
GTF3C5-204ENST00000372108 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
GTF3C5-204ENST00000372108 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
GTF3C5-204ENST00000372108 MRPL23Q16540 153 aaKnown RBP10.78□□□□□ -0.68
GTF3C5-204ENST00000372108 SPINK8P0C7L1 97 aa10.78□□□□□ -0.68
GTF3C5-204ENST00000372108 HERVK_113P63121 156 aa10.78□□□□□ -0.68
GTF3C5-204ENST00000372108 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 SEC11AP67812 179 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 Q6ZTC4 211 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
GTF3C5-204ENST00000372108 TMEM262E9PQX1 116 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 K7EP34 96 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 SCGB1D4Q6XE38 83 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 SMIM20Q8N5G0 67 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 A0A1B0GUV1 79 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
GTF3C5-204ENST00000372108 H3BRM9 83 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 GCSHP23434 173 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 C5orf47Q569G3 176 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 TAL2Q16559 108 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 CEND1Q8N111 149 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
GTF3C5-204ENST00000372108 J3QR89 54 aa10.74□□□□□ -0.69
GTF3C5-204ENST00000372108 FXYD2P54710 66 aa10.74□□□□□ -0.69
GTF3C5-204ENST00000372108 NANOS2P60321 138 aaKnown RBP10.74□□□□□ -0.69
GTF3C5-204ENST00000372108 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
GTF3C5-204ENST00000372108 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
GTF3C5-204ENST00000372108 C11orf45Q8TAV5 145 aa10.73□□□□□ -0.69
GTF3C5-204ENST00000372108 H3BNG1 76 aa10.72□□□□□ -0.69
GTF3C5-204ENST00000372108 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
GTF3C5-204ENST00000372108 LELP1Q5T871 98 aa10.72□□□□□ -0.69
GTF3C5-204ENST00000372108 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
GTF3C5-204ENST00000372108 A6NDN8 102 aa10.71□□□□□ -0.69
GTF3C5-204ENST00000372108 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.69
GTF3C5-204ENST00000372108 LINC00959A0A1B0GUT2 108 aa10.7□□□□□ -0.7
GTF3C5-204ENST00000372108 Q8N3U1 123 aa10.7□□□□□ -0.7
GTF3C5-204ENST00000372108 ZFAND6Q6FIF0 208 aa10.7□□□□□ -0.7
GTF3C5-204ENST00000372108 LYPD5Q6UWN5 251 aa10.7□□□□□ -0.7
GTF3C5-204ENST00000372108 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
GTF3C5-204ENST00000372108 HUWE1Q7Z6Z7 4374 aaKnown RBP10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 C9orf118A6NHY6 69 aa10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 SRSF9Q13242 221 aaKnown RBP eCLIP10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 A0A0J9YXY3 114 aa10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
GTF3C5-204ENST00000372108 IGHV3OR16-9A0A0B4J2B5 98 aa10.68□□□□□ -0.7
GTF3C5-204ENST00000372108 M0QXV9 152 aa10.68□□□□□ -0.7
GTF3C5-204ENST00000372108 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
GTF3C5-204ENST00000372108 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
GTF3C5-204ENST00000372108 LINC00269Q8N2A0 174 aa10.67□□□□□ -0.7
GTF3C5-204ENST00000372108 B5MCH6 92 aa10.66□□□□□ -0.7
GTF3C5-204ENST00000372108 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
GTF3C5-204ENST00000372108 ANGP03950 147 aaKnown RBP10.66□□□□□ -0.7
GTF3C5-204ENST00000372108 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
GTF3C5-204ENST00000372108 NHP2Q9NX24 153 aaKnown RBP10.66□□□□□ -0.7
GTF3C5-204ENST00000372108 K7ERJ3 54 aa10.65□□□□□ -0.7
GTF3C5-204ENST00000372108 NDUFA1O15239 70 aa10.65□□□□□ -0.7
GTF3C5-204ENST00000372108 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
GTF3C5-204ENST00000372108 SS18Q15532 418 aa10.65□□□□□ -0.7
GTF3C5-204ENST00000372108 LITAFQ99732 161 aa10.65□□□□□ -0.7
GTF3C5-204ENST00000372108 A0A087WZ39 114 aa10.64□□□□□ -0.71
GTF3C5-204ENST00000372108 XCL1P47992 114 aa10.64□□□□□ -0.71
GTF3C5-204ENST00000372108 C5orf38Q86SI9 138 aa10.64□□□□□ -0.71
GTF3C5-204ENST00000372108 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
GTF3C5-204ENST00000372108 REG3AQ06141 175 aa10.63□□□□□ -0.71
GTF3C5-204ENST00000372108 ANAPC13Q9BS18 74 aa10.63□□□□□ -0.71
GTF3C5-204ENST00000372108 Q9H8V8 135 aa10.63□□□□□ -0.71
GTF3C5-204ENST00000372108 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
GTF3C5-204ENST00000372108 ESRGQ1W209 222 aa10.62□□□□□ -0.71
GTF3C5-204ENST00000372108 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
GTF3C5-204ENST00000372108 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
GTF3C5-204ENST00000372108 TRAV10A0A0B4J240 114 aa10.61□□□□□ -0.71
GTF3C5-204ENST00000372108 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
GTF3C5-204ENST00000372108 SPCS1Q9Y6A9 102 aa10.61□□□□□ -0.71
GTF3C5-204ENST00000372108 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 NAA38Q9BRA0 125 aaKnown RBP10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 TIMM17BO60830 172 aa10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 MUSTN1Q8IVN3 82 aa10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
GTF3C5-204ENST00000372108 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 H3BUT2 72 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 SPANXDQ9BXN6 97 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 SPANXCQ9NY87 97 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
GTF3C5-204ENST00000372108 COL7A1Q02388 2944 aa10.58□□□□□ -0.72
GTF3C5-204ENST00000372108 A0A1W2PPM0 123 aa10.58□□□□□ -0.72
GTF3C5-204ENST00000372108 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
GTF3C5-204ENST00000372108 TOMM7Q9P0U1 55 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms