RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IGLV1-51P01701 117 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 FAM110AQ9BQ89 295 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 TRAV12-2A0A075B6T6 113 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 PRB2P02812 416 aaPredicted RBP8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 SPINK13Q1W4C9 94 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 LINC00467Q9BRT7 94 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
TSPAN1-201ENST00000372003 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
TSPAN1-201ENST00000372003 FAM19A3Q7Z5A8 133 aa8.24□□□□□ -1.09
TSPAN1-201ENST00000372003 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
TSPAN1-201ENST00000372003 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
TSPAN1-201ENST00000372003 CCDC179H3BU77 68 aa8.23□□□□□ -1.09
TSPAN1-201ENST00000372003 WIPF1O43516 503 aa8.23□□□□□ -1.09
TSPAN1-201ENST00000372003 BEAN1Q3B7T3 259 aa8.23□□□□□ -1.09
TSPAN1-201ENST00000372003 COX7A2LO14548 114 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 ATP5G1P05496 136 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 ZNF415Q09FC8 603 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 EGFEM1PQ0D2K5 195 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 NOTCH3Q9UM47 2321 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 MGAM2Q2M2H8 2515 aa8.22□□□□□ -1.09
TSPAN1-201ENST00000372003 TRACP01848 142 aa8.21□□□□□ -1.09
TSPAN1-201ENST00000372003 CMYA5Q8N3K9 4069 aa8.21□□□□□ -1.1
TSPAN1-201ENST00000372003 IGHV3-53P01767 116 aa8.21□□□□□ -1.1
TSPAN1-201ENST00000372003 HERVK_113P63121 156 aa8.21□□□□□ -1.1
TSPAN1-201ENST00000372003 CLEC2BQ92478 149 aa8.21□□□□□ -1.1
TSPAN1-201ENST00000372003 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
TSPAN1-201ENST00000372003 IGKV3-20P01619 116 aa8.2□□□□□ -1.1
TSPAN1-201ENST00000372003 KPRPQ5T749 579 aaPredicted RBP8.2□□□□□ -1.1
TSPAN1-201ENST00000372003 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
TSPAN1-201ENST00000372003 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
TSPAN1-201ENST00000372003 TRAV25A0A0B4J276 109 aa8.19□□□□□ -1.1
TSPAN1-201ENST00000372003 CXCL5P42830 114 aa8.19□□□□□ -1.1
TSPAN1-201ENST00000372003 FAM222AQ5U5X8 452 aa8.19□□□□□ -1.1
TSPAN1-201ENST00000372003 LINC00308Q8TCZ7 52 aa8.19□□□□□ -1.1
TSPAN1-201ENST00000372003 CSDC2Q9Y534 153 aaKnown RBP8.19□□□□□ -1.1
TSPAN1-201ENST00000372003 HERV-K104P63124 156 aa8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 RS1O15537 224 aa8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 CEMP1Q6PRD7 247 aaPredicted RBP8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 DAND5Q8N907 189 aa8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 CDKN2A-AS1Q9UH64 79 aa8.18□□□□□ -1.1
TSPAN1-201ENST00000372003 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
TSPAN1-201ENST00000372003 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
TSPAN1-201ENST00000372003 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
TSPAN1-201ENST00000372003 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
TSPAN1-201ENST00000372003 OVOL2Q9BRP0 275 aa8.16□□□□□ -1.1
TSPAN1-201ENST00000372003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 K7EIL1 84 aa8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 WFDC10AQ9H1F0 79 aa8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 NBEAL1Q6ZS30 2694 aa8.15□□□□□ -1.1
TSPAN1-201ENST00000372003 IGHV3-73A0A0B4J1V6 119 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 MRAPQ8TCY5 172 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 LINC01587Q99440 93 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 Q9H8V8 135 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 NOTCH1P46531 2555 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 A8MZ25 164 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 DEFB131AP59861 70 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 NPC2P61916 151 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 RNASE13Q5GAN3 156 aaKnown RBP8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
TSPAN1-201ENST00000372003 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 Q6ZSN1 163 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 C5orf38Q86SI9 138 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 ZNF625Q96I27 306 aaPredicted RBP8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 C19orf73Q9NVV2 129 aa8.13□□□□□ -1.11
TSPAN1-201ENST00000372003 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 SMIM1B2RUZ4 78 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 UQCRQO14949 82 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
TSPAN1-201ENST00000372003 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 INSP01308 110 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 IGHV4-30-4P0DP06 118 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 RPL28P46779 137 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 CMC4P56277 68 aaPredicted RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 DAZ2Q13117 558 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 COX6A2Q02221 97 aa8.11□□□□□ -1.11
TSPAN1-201ENST00000372003 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
TSPAN1-201ENST00000372003 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
TSPAN1-201ENST00000372003 MEGF8Q7Z7M0 2845 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms