RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
SSBP3-203ENST00000371319 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.49
SSBP3-203ENST00000371319 CEND1Q8N111 149 aa12.01□□□□□ -0.49
SSBP3-203ENST00000371319 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
SSBP3-203ENST00000371319 GCSHP23434 173 aa12.01□□□□□ -0.49
SSBP3-203ENST00000371319 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
SSBP3-203ENST00000371319 TM2D2Q9BX73 214 aa12.01□□□□□ -0.49
SSBP3-203ENST00000371319 FXYD2P54710 66 aa12□□□□□ -0.49
SSBP3-203ENST00000371319 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
SSBP3-203ENST00000371319 HIST1H4GQ99525 98 aa12□□□□□ -0.49
SSBP3-203ENST00000371319 NDUFA12Q9UI09 145 aa11.99□□□□□ -0.49
SSBP3-203ENST00000371319 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
SSBP3-203ENST00000371319 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 IGHV3OR16-9A0A0B4J2B5 98 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 A0A0J9YXY3 114 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 K7EP13 123 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
SSBP3-203ENST00000371319 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
SSBP3-203ENST00000371319 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
SSBP3-203ENST00000371319 SS18Q15532 418 aa11.97□□□□□ -0.49
SSBP3-203ENST00000371319 MGAM2Q2M2H8 2515 aa11.97□□□□□ -0.49
SSBP3-203ENST00000371319 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
SSBP3-203ENST00000371319 Q6ZVH6 145 aa11.96□□□□□ -0.49
SSBP3-203ENST00000371319 B9D2Q9BPU9 175 aa11.96□□□□□ -0.49
SSBP3-203ENST00000371319 A6NDN8 102 aa11.96□□□□□ -0.5
SSBP3-203ENST00000371319 NDUFA1O15239 70 aa11.96□□□□□ -0.5
SSBP3-203ENST00000371319 ESRGQ1W209 222 aa11.96□□□□□ -0.5
SSBP3-203ENST00000371319 A0A087WZ39 114 aa11.95□□□□□ -0.5
SSBP3-203ENST00000371319 CCL25O15444 150 aa11.95□□□□□ -0.5
SSBP3-203ENST00000371319 REG3AQ06141 175 aa11.94□□□□□ -0.5
SSBP3-203ENST00000371319 LITAFQ99732 161 aa11.94□□□□□ -0.5
SSBP3-203ENST00000371319 XCL1P47992 114 aa11.93□□□□□ -0.5
SSBP3-203ENST00000371319 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
SSBP3-203ENST00000371319 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
SSBP3-203ENST00000371319 WFDC10BQ8IUB3 73 aa11.93□□□□□ -0.5
SSBP3-203ENST00000371319 IGHV3-30P01768 117 aa11.92□□□□□ -0.5
SSBP3-203ENST00000371319 IGHV3-30-5P0DP03 117 aa11.92□□□□□ -0.5
SSBP3-203ENST00000371319 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
SSBP3-203ENST00000371319 COX11Q9Y6N1 276 aa11.92□□□□□ -0.5
SSBP3-203ENST00000371319 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-203ENST00000371319 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
SSBP3-203ENST00000371319 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
SSBP3-203ENST00000371319 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
SSBP3-203ENST00000371319 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-203ENST00000371319 Q9H8V8 135 aa11.91□□□□□ -0.5
SSBP3-203ENST00000371319 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
SSBP3-203ENST00000371319 CD164L2Q6UWJ8 174 aa11.9□□□□□ -0.5
SSBP3-203ENST00000371319 LINC01561Q8N1V8 128 aa11.9□□□□□ -0.5
SSBP3-203ENST00000371319 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
SSBP3-203ENST00000371319 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
SSBP3-203ENST00000371319 K7ERJ3 54 aa11.89□□□□□ -0.51
SSBP3-203ENST00000371319 TIMM17BO60830 172 aa11.89□□□□□ -0.51
SSBP3-203ENST00000371319 SMIM13P0DJ93 91 aa11.89□□□□□ -0.51
SSBP3-203ENST00000371319 ENHOQ6UWT2 76 aa11.89□□□□□ -0.51
SSBP3-203ENST00000371319 NHP2Q9NX24 153 aaKnown RBP11.89□□□□□ -0.51
SSBP3-203ENST00000371319 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
SSBP3-203ENST00000371319 A0A1B0GWB2 263 aa11.88□□□□□ -0.51
SSBP3-203ENST00000371319 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
SSBP3-203ENST00000371319 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
SSBP3-203ENST00000371319 SPANXCQ9NY87 97 aa11.88□□□□□ -0.51
SSBP3-203ENST00000371319 FOXI1Q12951 378 aa11.87□□□□□ -0.51
SSBP3-203ENST00000371319 KRTAP21-3Q3LHN1 58 aa11.87□□□□□ -0.51
SSBP3-203ENST00000371319 DNHD1Q96M86 4753 aa11.86□□□□□ -0.51
SSBP3-203ENST00000371319 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
SSBP3-203ENST00000371319 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
SSBP3-203ENST00000371319 TOMM7Q9P0U1 55 aa11.86□□□□□ -0.51
SSBP3-203ENST00000371319 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
SSBP3-203ENST00000371319 HERV-K104P63124 156 aa11.85□□□□□ -0.51
SSBP3-203ENST00000371319 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 A6NJY4 79 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 COX7A2LO14548 114 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 MIAQ16674 131 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
SSBP3-203ENST00000371319 IGLL5B9A064 214 aa11.83□□□□□ -0.52
SSBP3-203ENST00000371319 NHLRC4P0CG21 123 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-203ENST00000371319 CRPP02741 224 aa11.82□□□□□ -0.52
SSBP3-203ENST00000371319 NAA38Q9BRA0 125 aaKnown RBP11.82□□□□□ -0.52
SSBP3-203ENST00000371319 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
SSBP3-203ENST00000371319 A4D1N5 150 aa11.81□□□□□ -0.52
SSBP3-203ENST00000371319 H3BUT2 72 aa11.81□□□□□ -0.52
SSBP3-203ENST00000371319 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
SSBP3-203ENST00000371319 Q8IZM0 81 aa11.81□□□□□ -0.52
SSBP3-203ENST00000371319 EIF4EBP3O60516 100 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-203ENST00000371319 CFC1BP0CG36 223 aa11.8□□□□□ -0.52
SSBP3-203ENST00000371319 CFC1P0CG37 223 aa11.8□□□□□ -0.52
SSBP3-203ENST00000371319 DNAH10OSP0CZ25 163 aa11.8□□□□□ -0.52
SSBP3-203ENST00000371319 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
SSBP3-203ENST00000371319 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
SSBP3-203ENST00000371319 DAND5Q8N907 189 aa11.8□□□□□ -0.52
SSBP3-203ENST00000371319 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 APOMO95445 188 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 PRSS2P07478 247 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 IFITM1P13164 125 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 MALP21145 153 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
SSBP3-203ENST00000371319 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms