RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.4
CHTOP-203ENST00000368690 ACANP16112 2415 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 AKAP9Q99996 3911 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
CHTOP-203ENST00000368690 RS1O15537 224 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 HIST2H2BDQ6DRA6 164 aa12.52□□□□□ -0.41
CHTOP-203ENST00000368690 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
CHTOP-203ENST00000368690 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 HTN1P15515 57 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
CHTOP-203ENST00000368690 C11orf72Q8NBR9 251 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 TRAV13-2A0A0B4J235 113 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 ATOX1O00244 68 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 CRYGAP11844 174 aa12.5□□□□□ -0.41
CHTOP-203ENST00000368690 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 PRIMA1Q86XR5 153 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 FSHBP01225 129 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 MALP21145 153 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 C2orf48Q96LS8 159 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 FAM218AQ96MZ4 157 aa12.49□□□□□ -0.41
CHTOP-203ENST00000368690 RBMY1BA6NDE4 496 aaKnown RBP12.47□□□□□ -0.41
CHTOP-203ENST00000368690 RBMY1EA6NEQ0 496 aaKnown RBP12.47□□□□□ -0.41
CHTOP-203ENST00000368690 RBMY1DP0C7P1 496 aaKnown RBP12.47□□□□□ -0.41
CHTOP-203ENST00000368690 F5H768 121 aa12.47□□□□□ -0.41
CHTOP-203ENST00000368690 DEFB131AP59861 70 aa12.47□□□□□ -0.41
CHTOP-203ENST00000368690 J3KT08 172 aa12.46□□□□□ -0.41
CHTOP-203ENST00000368690 HOXD3P31249 432 aaPredicted RBP12.46□□□□□ -0.41
CHTOP-203ENST00000368690 RPS28P62857 69 aaKnown RBP12.46□□□□□ -0.41
CHTOP-203ENST00000368690 C10orf99Q6UWK7 81 aa12.46□□□□□ -0.42
CHTOP-203ENST00000368690 Q6YL49 198 aa12.46□□□□□ -0.42
CHTOP-203ENST00000368690 GAGE2AQ6NT46 116 aa12.45□□□□□ -0.42
CHTOP-203ENST00000368690 A0A0U1RRA0 63 aa12.45□□□□□ -0.42
CHTOP-203ENST00000368690 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
CHTOP-203ENST00000368690 CRPP02741 224 aa12.43□□□□□ -0.42
CHTOP-203ENST00000368690 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
CHTOP-203ENST00000368690 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
CHTOP-203ENST00000368690 OTOGQ6ZRI0 2925 aa12.43□□□□□ -0.42
CHTOP-203ENST00000368690 PRM2P04554 102 aa12.42□□□□□ -0.42
CHTOP-203ENST00000368690 KRTAP1-1Q07627 177 aa12.42□□□□□ -0.42
CHTOP-203ENST00000368690 Q6JHZ5 121 aa12.42□□□□□ -0.42
CHTOP-203ENST00000368690 SMR3AQ99954 134 aa12.42□□□□□ -0.42
CHTOP-203ENST00000368690 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
CHTOP-203ENST00000368690 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
CHTOP-203ENST00000368690 H0YGX0 51 aa12.41□□□□□ -0.42
CHTOP-203ENST00000368690 DNAL4O96015 105 aa12.41□□□□□ -0.42
CHTOP-203ENST00000368690 INSP01308 110 aa12.41□□□□□ -0.42
CHTOP-203ENST00000368690 RPL18AQ02543 176 aaKnown RBP12.41□□□□□ -0.42
CHTOP-203ENST00000368690 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
CHTOP-203ENST00000368690 SORL1Q92673 2214 aa12.4□□□□□ -0.42
CHTOP-203ENST00000368690 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
CHTOP-203ENST00000368690 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
CHTOP-203ENST00000368690 Q9HAA7 133 aa12.39□□□□□ -0.43
CHTOP-203ENST00000368690 MTORP42345 2549 aa12.39□□□□□ -0.43
CHTOP-203ENST00000368690 CUBNO60494 3623 aa12.38□□□□□ -0.43
CHTOP-203ENST00000368690 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
CHTOP-203ENST00000368690 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
CHTOP-203ENST00000368690 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
CHTOP-203ENST00000368690 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
CHTOP-203ENST00000368690 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
CHTOP-203ENST00000368690 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
CHTOP-203ENST00000368690 K7EQD1 137 aa12.36□□□□□ -0.43
CHTOP-203ENST00000368690 MAP6D1Q9H9H5 199 aa12.36□□□□□ -0.43
CHTOP-203ENST00000368690 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
CHTOP-203ENST00000368690 C5orf47Q569G3 176 aa12.36□□□□□ -0.43
CHTOP-203ENST00000368690 TMEM258P61165 79 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 SERP2Q8N6R1 65 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 HIVEP2P31629 2446 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 LOC107984640A0A0U1RRK4 108 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 MIR7-3HGQ8N6C7 128 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 COX7B2Q8TF08 81 aa12.35□□□□□ -0.43
CHTOP-203ENST00000368690 A0A087WYN8 130 aa12.33□□□□□ -0.44
CHTOP-203ENST00000368690 DNAJC9-AS1A6NH13 148 aa12.33□□□□□ -0.44
CHTOP-203ENST00000368690 FAM19A5Q7Z5A7 132 aaPredicted RBP12.33□□□□□ -0.44
CHTOP-203ENST00000368690 hADV29S1A0JD25 119 aa12.33□□□□□ -0.44
CHTOP-203ENST00000368690 LY6G6DO95868 133 aa12.33□□□□□ -0.44
CHTOP-203ENST00000368690 SLURP1P55000 103 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 C14orf132Q9NPU4 83 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 LINC00846Q9NV44 126 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 TMEM243Q9BU79 118 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 NF1P21359 2839 aa12.32□□□□□ -0.44
CHTOP-203ENST00000368690 OR13C6PQ8NH95 151 aa12.31□□□□□ -0.44
CHTOP-203ENST00000368690 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
CHTOP-203ENST00000368690 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
CHTOP-203ENST00000368690 UBE2L6O14933 153 aa12.3□□□□□ -0.44
CHTOP-203ENST00000368690 C9orf129Q5T035 196 aaKnown RBP12.3□□□□□ -0.44
CHTOP-203ENST00000368690 TMEM86BQ8N661 226 aa12.3□□□□□ -0.44
CHTOP-203ENST00000368690 ESM1Q9NQ30 184 aa12.3□□□□□ -0.44
CHTOP-203ENST00000368690 CCL18P55774 89 aa12.29□□□□□ -0.44
CHTOP-203ENST00000368690 IGKV3D-7A0A0C4DH55 119 aa12.28□□□□□ -0.44
CHTOP-203ENST00000368690 LINC00158P58513 81 aa12.27□□□□□ -0.45
CHTOP-203ENST00000368690 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.45
CHTOP-203ENST00000368690 S100A7L2Q5SY68 101 aa12.27□□□□□ -0.45
CHTOP-203ENST00000368690 C1orf158Q8N1D5 194 aa12.27□□□□□ -0.45
CHTOP-203ENST00000368690 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms