RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 TNFP01375 233 aa-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 SPRR1BP22528 89 aa-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 TENM2Q9NT68 2774 aa-0.48□□□□□ -2.49
ECHDC1-201ENST00000368287 MUC2Q02817 5179 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 LOC285095A0A1B0GVY8 99 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 K7EQZ3 153 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 IGLC1P0CG04 106 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 RPL13AP3Q6NVV1 102 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 MYOZ3Q8TDC0 251 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 DPH3P1Q9H4G8 78 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 CDC42SE2Q9NRR3 84 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 ARHGEF12Q9NZN5 1544 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 LRP1BQ9NZR2 4599 aa-0.49□□□□□ -2.49
ECHDC1-201ENST00000368287 APC2O95996 2303 aa-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 SNAPC5O75971 98 aa-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 KRTAP19-7Q3SYF9 63 aa-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 SPRR4Q96PI1 79 aa-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 KTN1Q86UP2 1357 aaKnown RBP-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 PRKDCP78527 4128 aaKnown RBP-0.5□□□□□ -2.49
ECHDC1-201ENST00000368287 SCN7AQ01118 1682 aa-0.51□□□□□ -2.49
ECHDC1-201ENST00000368287 HMGXB3Q12766 1538 aa-0.51□□□□□ -2.49
ECHDC1-201ENST00000368287 NXT2Q9NPJ8 142 aaKnown RBP-0.51□□□□□ -2.49
ECHDC1-201ENST00000368287 MYOM2P54296 1465 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 SHANK2Q9UPX8 1470 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 SMG6Q86US8 1419 aaKnown RBP-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 UBE2L5PA0A1B0GUS4 154 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 DLEU1O43261 78 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 COX6B1P14854 86 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 UBE2L3P68036 154 aaKnown RBP-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 C10orf113Q5VZT2 155 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 FAM223AQ8IWN6 122 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 DEFB123Q8N688 67 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 ARL2-SNX15V9GYD0 113 aa-0.52□□□□□ -2.49
ECHDC1-201ENST00000368287 COL6A3P12111 3177 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 WDR7Q9Y4E6 1490 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 SETXQ7Z333 2677 aaKnown RBP-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 CHD8Q9HCK8 2581 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 MGPP08493 103 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 GNG11P61952 73 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 SFTA2Q6UW10 78 aa-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 TMEM263Q8WUH6 116 aaKnown RBP-0.53□□□□□ -2.49
ECHDC1-201ENST00000368287 POLA1P09884 1462 aaPredicted RBP-0.54□□□□□ -2.5
ECHDC1-201ENST00000368287 URB1O60287 2271 aaKnown RBP-0.54□□□□□ -2.5
ECHDC1-201ENST00000368287 LCN9Q8WX39 176 aa-0.54□□□□□ -2.5
ECHDC1-201ENST00000368287 TULP4Q9NRJ4 1543 aa-0.54□□□□□ -2.5
ECHDC1-201ENST00000368287 EP300Q09472 2414 aaPredicted RBP-0.55□□□□□ -2.5
ECHDC1-201ENST00000368287 LINC00959A0A1B0GUT2 108 aa-0.55□□□□□ -2.5
ECHDC1-201ENST00000368287 FAIMQ9NVQ4 179 aa-0.55□□□□□ -2.5
ECHDC1-201ENST00000368287 UQCR10Q9UDW1 63 aa-0.55□□□□□ -2.5
ECHDC1-201ENST00000368287 SCAPERQ9BY12 1400 aa-0.55□□□□□ -2.5
ECHDC1-201ENST00000368287 FAM24AA6NFZ4 105 aa-0.56□□□□□ -2.5
ECHDC1-201ENST00000368287 UBA52P62987 128 aaKnown RBP-0.56□□□□□ -2.5
ECHDC1-201ENST00000368287 Q0VG73 95 aa-0.56□□□□□ -2.5
ECHDC1-201ENST00000368287 FAM167A-AS1Q96KT0 104 aa-0.56□□□□□ -2.5
ECHDC1-201ENST00000368287 MANBALQ9NQG1 85 aa-0.56□□□□□ -2.5
ECHDC1-201ENST00000368287 ACANP16112 2415 aa-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 EHBP1L1Q8N3D4 1523 aa-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 IER3IP1Q9Y5U9 82 aa-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 GAPVD1Q14C86 1478 aa-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 MAGI1Q96QZ7 1491 aaPredicted RBP-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 DNAJC13O75165 2243 aa-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 MAP1AP78559 2803 aaPredicted RBP-0.57□□□□□ -2.5
ECHDC1-201ENST00000368287 FLNBO75369 2602 aaKnown RBP-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 EFCAB10A6NFE3 127 aa-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 UBE2D3P61077 147 aa-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 UBE2D2P62837 147 aa-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 LINC01600Q96MT4 127 aa-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 FXYD6Q9H0Q3 95 aa-0.58□□□□□ -2.5
ECHDC1-201ENST00000368287 TRBV7-4A0A0J9YYF1 115 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 FAM223BA6NKX1 122 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 F6UZH7 168 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 CORTO00230 105 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 ATP5EP56381 51 aaPredicted RBP-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 KLK9Q2XQG4 91 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 FDCSPQ8NFU4 85 aa-0.59□□□□□ -2.5
ECHDC1-201ENST00000368287 PDZD2O15018 2839 aa-0.6□□□□□ -2.5
ECHDC1-201ENST00000368287 TOP2BQ02880 1626 aa-0.6□□□□□ -2.5
ECHDC1-201ENST00000368287 CC2D2AQ9P2K1 1620 aa-0.6□□□□□ -2.5
ECHDC1-201ENST00000368287 ADGRL2O95490 1459 aa-0.6□□□□□ -2.5
ECHDC1-201ENST00000368287 S100A1P23297 94 aa-0.6□□□□□ -2.51
ECHDC1-201ENST00000368287 GNG4P50150 75 aa-0.6□□□□□ -2.51
ECHDC1-201ENST00000368287 PPP3R1P63098 170 aa-0.6□□□□□ -2.51
ECHDC1-201ENST00000368287 SVBPQ8N300 66 aa-0.6□□□□□ -2.51
ECHDC1-201ENST00000368287 C1orf167Q5SNV9 1468 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 NUP188Q5SRE5 1749 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 LINC00587B1AMM8 73 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 LOC730098B7Z3J9 87 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 SPRR2BP35325 72 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 WHAMMP3Q1A5X7 153 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 FMN2Q9NZ56 1722 aa-0.61□□□□□ -2.51
ECHDC1-201ENST00000368287 NRKQ7Z2Y5 1582 aa-0.62□□□□□ -2.51
ECHDC1-201ENST00000368287 KIAA0556O60303 1618 aa-0.62□□□□□ -2.51
ECHDC1-201ENST00000368287 PRO1854Q9UHT4 67 aa-0.62□□□□□ -2.51
ECHDC1-201ENST00000368287 SPHKAPQ2M3C7 1700 aa-0.62□□□□□ -2.51
ECHDC1-201ENST00000368287 PZPP20742 1482 aa-0.62□□□□□ -2.51
ECHDC1-201ENST00000368287 TRAPPC2P0DI81 140 aa-0.63□□□□□ -2.51
ECHDC1-201ENST00000368287 TRAPPC2BP0DI82 140 aa-0.63□□□□□ -2.51
ECHDC1-201ENST00000368287 KRTAP19-8Q3LI54 63 aa-0.63□□□□□ -2.51
ECHDC1-201ENST00000368287 DEFB105AQ8NG35 78 aa-0.63□□□□□ -2.51
ECHDC1-201ENST00000368287 C2orf88Q9BSF0 95 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms