RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
USF1-201ENST00000368019 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
USF1-201ENST00000368019 SORL1Q92673 2214 aa8.31□□□□□ -1.08
USF1-201ENST00000368019 TRAV12-2A0A075B6T6 113 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 H7C423 109 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 IGHV3-53P01767 116 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 CIRBPQ14011 172 aaKnown RBP8.3□□□□□ -1.08
USF1-201ENST00000368019 TTC32Q5I0X7 151 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
USF1-201ENST00000368019 EDN2P20800 178 aa8.29□□□□□ -1.08
USF1-201ENST00000368019 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
USF1-201ENST00000368019 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 H7C2G1 150 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE7O76087 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE12FP0CL80 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE12GP0CL81 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE12IP0CL82 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 HERVK_113P63121 156 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 GAGE4Q13068 117 aa8.28□□□□□ -1.08
USF1-201ENST00000368019 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
USF1-201ENST00000368019 TRAV8-3A0A0A6YYJ7 113 aa8.27□□□□□ -1.09
USF1-201ENST00000368019 TRAV4A0A0B4J268 109 aa8.27□□□□□ -1.09
USF1-201ENST00000368019 RS1O15537 224 aa8.27□□□□□ -1.09
USF1-201ENST00000368019 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
USF1-201ENST00000368019 TEX49A0A1B0GTD5 131 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 CCL24O00175 119 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 COX7A2LO14548 114 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 PRSS2P07478 247 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 RBMY1A1P0DJD3 496 aaKnown RBP8.26□□□□□ -1.09
USF1-201ENST00000368019 RBMY1CP0DJD4 496 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 RBMY1FQ15415 496 aaKnown RBP8.26□□□□□ -1.09
USF1-201ENST00000368019 DUX3Q96PT4 197 aa8.26□□□□□ -1.09
USF1-201ENST00000368019 TRACP01848 142 aa8.25□□□□□ -1.09
USF1-201ENST00000368019 HERV-K104P63124 156 aa8.25□□□□□ -1.09
USF1-201ENST00000368019 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
USF1-201ENST00000368019 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
USF1-201ENST00000368019 TENM2Q9NT68 2774 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 SYNJ2BPP57105 145 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 PEMTQ9UBM1 199 aa8.24□□□□□ -1.09
USF1-201ENST00000368019 DYNC2H1Q8NCM8 4307 aaKnown RBP8.23□□□□□ -1.09
USF1-201ENST00000368019 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 ATP5G1P05496 136 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 OVOL2Q9BRP0 275 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
USF1-201ENST00000368019 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
USF1-201ENST00000368019 INSP01308 110 aa8.22□□□□□ -1.09
USF1-201ENST00000368019 DEFB131AP59861 70 aa8.22□□□□□ -1.09
USF1-201ENST00000368019 SDIM1Q6ZPB5 146 aa8.22□□□□□ -1.09
USF1-201ENST00000368019 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
USF1-201ENST00000368019 RBMY1BA6NDE4 496 aaKnown RBP8.21□□□□□ -1.1
USF1-201ENST00000368019 RBMY1EA6NEQ0 496 aaKnown RBP8.21□□□□□ -1.1
USF1-201ENST00000368019 C3orf84H3BNL1 204 aa8.21□□□□□ -1.1
USF1-201ENST00000368019 RBMY1DP0C7P1 496 aaKnown RBP8.21□□□□□ -1.1
USF1-201ENST00000368019 DAND5Q8N907 189 aa8.21□□□□□ -1.1
USF1-201ENST00000368019 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
USF1-201ENST00000368019 C4orf3Q8WVX3 66 aa8.21□□□□□ -1.1
USF1-201ENST00000368019 TRAV25A0A0B4J276 109 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 B5MCH6 92 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 CXCL5P42830 114 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 DGAT2L7PQ6IED9 249 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
USF1-201ENST00000368019 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 CLEC2BQ92478 149 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 TMEM126AQ9H061 195 aa8.2□□□□□ -1.1
USF1-201ENST00000368019 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
USF1-201ENST00000368019 IGHV3OR16-12A0A075B7B8 117 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
USF1-201ENST00000368019 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
USF1-201ENST00000368019 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
USF1-201ENST00000368019 Q9H8V8 135 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
USF1-201ENST00000368019 SS18L2Q9UHA2 77 aa8.19□□□□□ -1.1
USF1-201ENST00000368019 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
USF1-201ENST00000368019 CCDC179H3BU77 68 aa8.18□□□□□ -1.1
USF1-201ENST00000368019 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
USF1-201ENST00000368019 Q6ZSN1 163 aa8.18□□□□□ -1.1
USF1-201ENST00000368019 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
USF1-201ENST00000368019 FAM110AQ9BQ89 295 aa8.18□□□□□ -1.1
USF1-201ENST00000368019 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
USF1-201ENST00000368019 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
USF1-201ENST00000368019 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
USF1-201ENST00000368019 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
USF1-201ENST00000368019 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
USF1-201ENST00000368019 LINC01587Q99440 93 aa8.17□□□□□ -1.1
USF1-201ENST00000368019 F5H768 121 aa8.16□□□□□ -1.1
USF1-201ENST00000368019 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms