RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PRO3102Q9H379 93 aa11.39□□□□□ -0.59
NUCKS1-201ENST00000367142 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
NUCKS1-201ENST00000367142 NBASA2RRP1 2371 aa11.39□□□□□ -0.59
NUCKS1-201ENST00000367142 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 BRI3O95415 125 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 C11orf21Q9P2W6 132 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 OBSL1O75147 1896 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 F8WDY8 70 aa11.38□□□□□ -0.59
NUCKS1-201ENST00000367142 IGLV1-51P01701 117 aa11.37□□□□□ -0.59
NUCKS1-201ENST00000367142 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
NUCKS1-201ENST00000367142 C16orf95Q9H693 158 aa11.36□□□□□ -0.59
NUCKS1-201ENST00000367142 PLXNB3Q9ULL4 1909 aa11.36□□□□□ -0.59
NUCKS1-201ENST00000367142 Q6ZTC4 211 aa11.35□□□□□ -0.59
NUCKS1-201ENST00000367142 NTM-AS1Q6ZSK4 140 aa11.35□□□□□ -0.59
NUCKS1-201ENST00000367142 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 CREBBPQ92793 2442 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 COL4A3Q01955 1670 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 TRBV10-3A0A0K0K1G6 114 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 LIMD2Q9BT23 127 aa11.34□□□□□ -0.59
NUCKS1-201ENST00000367142 AVPP01185 164 aa11.33□□□□□ -0.6
NUCKS1-201ENST00000367142 Q9BRP9 147 aa11.33□□□□□ -0.6
NUCKS1-201ENST00000367142 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
NUCKS1-201ENST00000367142 PLCE1Q9P212 2302 aa11.33□□□□□ -0.6
NUCKS1-201ENST00000367142 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
NUCKS1-201ENST00000367142 PCNX2A6NKB5 2137 aa11.32□□□□□ -0.6
NUCKS1-201ENST00000367142 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
NUCKS1-201ENST00000367142 TRBV7-6A0A0J9YX20 115 aa11.31□□□□□ -0.6
NUCKS1-201ENST00000367142 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
NUCKS1-201ENST00000367142 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
NUCKS1-201ENST00000367142 Q8N814 137 aa11.31□□□□□ -0.6
NUCKS1-201ENST00000367142 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
NUCKS1-201ENST00000367142 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
NUCKS1-201ENST00000367142 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
NUCKS1-201ENST00000367142 FHL2Q14192 279 aa11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 C2orf16Q68DN1 1984 aa11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 COX7CP15954 63 aa11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 PTPRQQ9UMZ3 2332 aa11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
NUCKS1-201ENST00000367142 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
NUCKS1-201ENST00000367142 TECTAO75443 2155 aa11.27□□□□□ -0.6
NUCKS1-201ENST00000367142 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.6
NUCKS1-201ENST00000367142 EDN2P20800 178 aa11.27□□□□□ -0.6
NUCKS1-201ENST00000367142 CDSNQ15517 529 aa11.27□□□□□ -0.61
NUCKS1-201ENST00000367142 TNCP24821 2201 aa11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 LTBP2Q14767 1821 aa11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 IGIPA6NJ69 53 aa11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 SPINK1P00995 79 aa11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 MUC6Q6W4X9 2439 aa11.26□□□□□ -0.61
NUCKS1-201ENST00000367142 COX6A2Q02221 97 aa11.25□□□□□ -0.61
NUCKS1-201ENST00000367142 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
NUCKS1-201ENST00000367142 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
NUCKS1-201ENST00000367142 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
NUCKS1-201ENST00000367142 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
NUCKS1-201ENST00000367142 TRAV7A0A075B6U4 112 aa11.24□□□□□ -0.61
NUCKS1-201ENST00000367142 LYPD5Q6UWN5 251 aa11.23□□□□□ -0.61
NUCKS1-201ENST00000367142 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
NUCKS1-201ENST00000367142 ALPK3Q96L96 1907 aa11.22□□□□□ -0.61
NUCKS1-201ENST00000367142 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
NUCKS1-201ENST00000367142 PCOTHQ58A44 107 aa11.21□□□□□ -0.61
NUCKS1-201ENST00000367142 A0A087WSZ3 146 aa11.21□□□□□ -0.62
NUCKS1-201ENST00000367142 Q6Q795 121 aa11.21□□□□□ -0.62
NUCKS1-201ENST00000367142 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
NUCKS1-201ENST00000367142 ZNF580Q9UK33 172 aa11.2□□□□□ -0.62
NUCKS1-201ENST00000367142 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
NUCKS1-201ENST00000367142 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
NUCKS1-201ENST00000367142 A0A087WYN8 130 aa11.2□□□□□ -0.62
NUCKS1-201ENST00000367142 Q8N2B8 174 aa11.19□□□□□ -0.62
NUCKS1-201ENST00000367142 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
NUCKS1-201ENST00000367142 LINC00694P0DN24 101 aa11.19□□□□□ -0.62
NUCKS1-201ENST00000367142 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
NUCKS1-201ENST00000367142 H0Y9P7 68 aa11.18□□□□□ -0.62
NUCKS1-201ENST00000367142 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
NUCKS1-201ENST00000367142 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
NUCKS1-201ENST00000367142 DSCAMO60469 2012 aa11.17□□□□□ -0.62
NUCKS1-201ENST00000367142 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
NUCKS1-201ENST00000367142 SHANK1Q9Y566 2161 aa11.16□□□□□ -0.62
NUCKS1-201ENST00000367142 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
NUCKS1-201ENST00000367142 FHL3Q13643 280 aa11.16□□□□□ -0.62
NUCKS1-201ENST00000367142 BEAN1Q3B7T3 259 aa11.15□□□□□ -0.62
NUCKS1-201ENST00000367142 CCDC179H3BU77 68 aa11.15□□□□□ -0.62
NUCKS1-201ENST00000367142 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
NUCKS1-201ENST00000367142 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.63
NUCKS1-201ENST00000367142 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
NUCKS1-201ENST00000367142 C1orf195Q5TG92 126 aa11.14□□□□□ -0.63
NUCKS1-201ENST00000367142 AMELXQ99217 191 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 MDFIQ99750 246 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 KIAA1549LQ6ZVL6 1849 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 PRLHP81277 87 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 Q6ZRU5 148 aa11.13□□□□□ -0.63
NUCKS1-201ENST00000367142 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
NUCKS1-201ENST00000367142 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
NUCKS1-201ENST00000367142 XGP55808 180 aa11.12□□□□□ -0.63
NUCKS1-201ENST00000367142 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
NUCKS1-201ENST00000367142 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms