RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
MRPL55-217ENST00000366746 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
MRPL55-217ENST00000366746 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
MRPL55-217ENST00000366746 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
MRPL55-217ENST00000366746 LINC00862A6NCI5 91 aa10.06□□□□□ -0.8
MRPL55-217ENST00000366746 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
MRPL55-217ENST00000366746 UBE2BP63146 152 aa10.06□□□□□ -0.8
MRPL55-217ENST00000366746 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
MRPL55-217ENST00000366746 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
MRPL55-217ENST00000366746 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
MRPL55-217ENST00000366746 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 CKS2P33552 79 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
MRPL55-217ENST00000366746 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 NAT8BQ9UHF3 227 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 V9GYV3 84 aa10.05□□□□□ -0.8
MRPL55-217ENST00000366746 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
MRPL55-217ENST00000366746 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
MRPL55-217ENST00000366746 M0QXV9 152 aa10.04□□□□□ -0.8
MRPL55-217ENST00000366746 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
MRPL55-217ENST00000366746 HBBP68871 147 aa10.04□□□□□ -0.8
MRPL55-217ENST00000366746 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
MRPL55-217ENST00000366746 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
MRPL55-217ENST00000366746 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
MRPL55-217ENST00000366746 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
MRPL55-217ENST00000366746 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
MRPL55-217ENST00000366746 KRTAP7-1Q8IUC3 87 aa10.01□□□□□ -0.81
MRPL55-217ENST00000366746 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
MRPL55-217ENST00000366746 A0A1B0GW15 77 aa10□□□□□ -0.81
MRPL55-217ENST00000366746 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
MRPL55-217ENST00000366746 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
MRPL55-217ENST00000366746 CARHSP1Q9Y2V2 147 aaKnown RBP10□□□□□ -0.81
MRPL55-217ENST00000366746 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
MRPL55-217ENST00000366746 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
MRPL55-217ENST00000366746 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
MRPL55-217ENST00000366746 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
MRPL55-217ENST00000366746 MUC2Q02817 5179 aa9.99□□□□□ -0.81
MRPL55-217ENST00000366746 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
MRPL55-217ENST00000366746 D6R8Y8 96 aa9.98□□□□□ -0.81
MRPL55-217ENST00000366746 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
MRPL55-217ENST00000366746 F8W036 122 aa9.97□□□□□ -0.81
MRPL55-217ENST00000366746 RAB5AP20339 215 aa9.97□□□□□ -0.81
MRPL55-217ENST00000366746 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
MRPL55-217ENST00000366746 S100A8P05109 93 aa9.96□□□□□ -0.82
MRPL55-217ENST00000366746 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
MRPL55-217ENST00000366746 ADIRFQ15847 76 aa9.96□□□□□ -0.82
MRPL55-217ENST00000366746 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
MRPL55-217ENST00000366746 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.82
MRPL55-217ENST00000366746 ZNF861PO60384 105 aa9.95□□□□□ -0.82
MRPL55-217ENST00000366746 NPYP01303 97 aa9.95□□□□□ -0.82
MRPL55-217ENST00000366746 TSPAN13O95857 204 aa9.94□□□□□ -0.82
MRPL55-217ENST00000366746 PPBPP02775 128 aa9.94□□□□□ -0.82
MRPL55-217ENST00000366746 PYGO1Q9Y3Y4 419 aa9.94□□□□□ -0.82
MRPL55-217ENST00000366746 MRPL54Q6P161 138 aaKnown RBP9.93□□□□□ -0.82
MRPL55-217ENST00000366746 AKAP14Q86UN6 197 aa9.93□□□□□ -0.82
MRPL55-217ENST00000366746 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
MRPL55-217ENST00000366746 NAT8Q9UHE5 227 aa9.93□□□□□ -0.82
MRPL55-217ENST00000366746 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
MRPL55-217ENST00000366746 NUPR1O60356 82 aa9.92□□□□□ -0.82
MRPL55-217ENST00000366746 PRSS2P07478 247 aa9.92□□□□□ -0.82
MRPL55-217ENST00000366746 TEX43Q6ZNM6 134 aa9.92□□□□□ -0.82
MRPL55-217ENST00000366746 CKS1BP61024 79 aa9.91□□□□□ -0.82
MRPL55-217ENST00000366746 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
MRPL55-217ENST00000366746 ORMDL3Q8N138 153 aa9.91□□□□□ -0.82
MRPL55-217ENST00000366746 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
MRPL55-217ENST00000366746 KRTAP9-2Q9BYQ4 174 aa9.91□□□□□ -0.82
MRPL55-217ENST00000366746 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
MRPL55-217ENST00000366746 C2orf88Q9BSF0 95 aa9.9□□□□□ -0.82
MRPL55-217ENST00000366746 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 Q6ZN92 141 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 TMEM136Q6ZRR5 245 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 LINC00469Q8N7U9 141 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 PRELID3AQ96N28 172 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 CTDSP1Q9GZU7 261 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
MRPL55-217ENST00000366746 A0A1B0GXF2 115 aa9.88□□□□□ -0.83
MRPL55-217ENST00000366746 XAGE1AQ9HD64 81 aa9.88□□□□□ -0.83
MRPL55-217ENST00000366746 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
MRPL55-217ENST00000366746 VCX2Q9H322 139 aa9.87□□□□□ -0.83
MRPL55-217ENST00000366746 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
MRPL55-217ENST00000366746 C9JQL5 133 aa9.86□□□□□ -0.83
MRPL55-217ENST00000366746 CRYGAP11844 174 aa9.86□□□□□ -0.83
MRPL55-217ENST00000366746 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
MRPL55-217ENST00000366746 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-217ENST00000366746 A0A087X002 238 aa9.85□□□□□ -0.83
MRPL55-217ENST00000366746 PEA15Q15121 130 aa9.85□□□□□ -0.83
MRPL55-217ENST00000366746 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
MRPL55-217ENST00000366746 Q8IZM0 81 aa9.85□□□□□ -0.83
MRPL55-217ENST00000366746 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
MRPL55-217ENST00000366746 BCE1O60756 84 aa9.84□□□□□ -0.83
MRPL55-217ENST00000366746 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
MRPL55-217ENST00000366746 TP73-AS1Q9UF72 201 aa9.84□□□□□ -0.83
MRPL55-217ENST00000366746 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
MRPL55-217ENST00000366746 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
MRPL55-217ENST00000366746 ATP5L2Q7Z4Y8 100 aa9.83□□□□□ -0.84
MRPL55-217ENST00000366746 AMELXQ99217 191 aa9.83□□□□□ -0.84
MRPL55-217ENST00000366746 MAP1LC3AQ9H492 121 aa9.83□□□□□ -0.84
MRPL55-217ENST00000366746 hCG_2014768A0A024R1R8 64 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms