RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 GEMIN7Q9H840 131 aaKnown RBP4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 TRAV8-3A0A0A6YYJ7 113 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 TRAV8-4A0A0B4J246 113 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 LINC00959A0A1B0GUT2 108 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 DPM2O94777 84 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 SCGB1D1O95968 90 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 HERVK_113P63121 156 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 ZC2HC1BQ5TFG8 222 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 RMI2Q96E14 147 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 CHAC1Q9BUX1 264 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 C1orf43Q9BWL3 253 aa4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 MRPL35Q9NZE8 188 aaKnown RBP4.57□□□□□ -1.68
RNU1-55P-201ENST00000365510 HSPG2P98160 4391 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 NBDYA0A0U1RRE5 68 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 TINCRA0A1B0GVN0 87 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 IBA57-AS1B1ANH7 110 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGKCP01834 107 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 XCL1P47992 114 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 JOSD1Q15040 202 aaPredicted RBP4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 FAM19A3Q7Z5A8 133 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 LINC00469Q8N7U9 141 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 CHCHD10Q8WYQ3 142 aaPredicted RBP4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 Q9HAA7 133 aa4.56□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGLV10-54A0A075B6I4 117 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 C11orf86A6NJI1 115 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 H3BRM9 83 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 SMIM6P0DI80 62 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 TMEM170BQ5T4T1 132 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 NFE4Q86UQ8 179 aa4.55□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 HERVK_113P61574 105 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 PYY3Q5JQD4 70 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 ATOH7Q8N100 152 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 KRTAP1-5Q9BYS1 174 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 COX11Q9Y6N1 276 aa4.54□□□□□ -1.68
RNU1-55P-201ENST00000365510 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 COX7A2LO14548 114 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 APOMO95445 188 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 ZNF22P17026 224 aaPredicted RBP4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 MALP21145 153 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 CDKN2A-AS1Q9UH64 79 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 LRP1BQ9NZR2 4599 aa4.53□□□□□ -1.68
RNU1-55P-201ENST00000365510 A0A087WZ39 114 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 PSCAO43653 123 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 SPINK8P0C7L1 97 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 S100A12P80511 92 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 COX6A2Q02221 97 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 TNP2Q05952 138 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 FOXI1Q12951 378 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 VAMP8Q9BV40 100 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 HERC1Q15751 4861 aa4.52□□□□□ -1.69
RNU1-55P-201ENST00000365510 IGHV1-58A0A0C4DH39 117 aa4.51□□□□□ -1.69
RNU1-55P-201ENST00000365510 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
RNU1-55P-201ENST00000365510 Q6ZR54 194 aa4.51□□□□□ -1.69
RNU1-55P-201ENST00000365510 LINC00336Q6ZUF6 198 aa4.51□□□□□ -1.69
RNU1-55P-201ENST00000365510 C6orf223Q8N319 242 aa4.51□□□□□ -1.69
RNU1-55P-201ENST00000365510 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 hDV102S1A0JD36 115 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 E9PLD3 99 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 C1orf134Q5TEV5 83 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 KRTAP26-1Q6PEX3 210 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 STPG4Q8N801 248 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 ORAOV1Q8WV07 137 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
RNU1-55P-201ENST00000365510 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 LEPROTO15243 131 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 PRSS2P07478 247 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 NMUP48645 174 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 SPATA45Q537H7 98 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 ANKRD39Q53RE8 183 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 CDPF1Q6NVV7 123 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 Q8IZM0 81 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 TOMM7Q9P0U1 55 aa4.49□□□□□ -1.69
RNU1-55P-201ENST00000365510 USP17L23D6RBM5 183 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms