RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 LAMA5O15230 3695 aa-0.91□□□□□ -2.55
RNU6-560P-201ENST00000364007 UBR4Q5T4S7 5183 aa-0.91□□□□□ -2.55
RNU6-560P-201ENST00000364007 SPRR2BP35325 72 aa-0.91□□□□□ -2.56
RNU6-560P-201ENST00000364007 CHD8Q9HCK8 2581 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 PRKDCP78527 4128 aaKnown RBP-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 SFT2D2O95562 160 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 BTG2P78543 158 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 LINC00474Q9P2X8 69 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 NSD3Q9BZ95 1437 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 DOPEY1Q5JWR5 2465 aa-0.92□□□□□ -2.56
RNU6-560P-201ENST00000364007 LOC730098B7Z3J9 87 aa-0.93□□□□□ -2.56
RNU6-560P-201ENST00000364007 FAM107BQ9H098 131 aa-0.93□□□□□ -2.56
RNU6-560P-201ENST00000364007 SHANK2Q9UPX8 1470 aa-0.93□□□□□ -2.56
RNU6-560P-201ENST00000364007 APOC2P02655 101 aa-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 COMMD6Q7Z4G1 85 aa-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 C5orf38Q86SI9 138 aa-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 DEFB123Q8N688 67 aa-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 GAPVD1Q14C86 1478 aa-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 EPPK1P58107 5090 aaKnown RBP-0.94□□□□□ -2.56
RNU6-560P-201ENST00000364007 NAIPQ13075 1403 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 SETXQ7Z333 2677 aaKnown RBP-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 LOC285095A0A1B0GVY8 99 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 MRPL54Q6P161 138 aaKnown RBP-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 C8orf59Q8N0T1 100 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 FXYD6Q9H0Q3 95 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 POLA1P09884 1462 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 MAP1AP78559 2803 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 NUP188Q5SRE5 1749 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 NALCNQ8IZF0 1738 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 ZFHX3Q15911 3703 aa-0.95□□□□□ -2.56
RNU6-560P-201ENST00000364007 NF1P21359 2839 aa-0.96□□□□□ -2.56
RNU6-560P-201ENST00000364007 SSSCA1O60232 199 aa-0.96□□□□□ -2.56
RNU6-560P-201ENST00000364007 TSC22D3Q99576 134 aa-0.96□□□□□ -2.56
RNU6-560P-201ENST00000364007 TULP4Q9NRJ4 1543 aa-0.96□□□□□ -2.56
RNU6-560P-201ENST00000364007 CHKB-CPT1BH3BT56 60 aa-0.97□□□□□ -2.56
RNU6-560P-201ENST00000364007 FGF7P21781 194 aa-0.97□□□□□ -2.56
RNU6-560P-201ENST00000364007 STARD9Q9P2P6 4700 aa-0.97□□□□□ -2.56
RNU6-560P-201ENST00000364007 FMN2Q9NZ56 1722 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 PDZD2O15018 2839 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 OOSP1A8MZH6 123 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 IFNGP01579 166 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 MGPP08493 103 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 KRTAP19-8Q3LI54 63 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 MYOZ3Q8TDC0 251 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 KIAA0556O60303 1618 aa-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 SMG6Q86US8 1419 aaKnown RBP-0.98□□□□□ -2.57
RNU6-560P-201ENST00000364007 CNOT1A5YKK6 2376 aaKnown RBP-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 K7EP13 123 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 IGLC1P0CG04 106 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 MT4P47944 62 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 S100A12P80511 92 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 C10orf113Q5VZT2 155 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 A2ML1A8K2U0 1454 aa-0.99□□□□□ -2.57
RNU6-560P-201ENST00000364007 CREBBPQ92793 2442 aa-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 TMEM263Q8WUH6 116 aaKnown RBP-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 SPRR4Q96PI1 79 aa-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 NXT2Q9NPJ8 142 aaKnown RBP-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 MAGI1Q96QZ7 1491 aaPredicted RBP-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 HMGXB3Q12766 1538 aa-1□□□□□ -2.57
RNU6-560P-201ENST00000364007 FAM223AQ8IWN6 122 aa-1.01□□□□□ -2.57
RNU6-560P-201ENST00000364007 CDC42SE2Q9NRR3 84 aa-1.01□□□□□ -2.57
RNU6-560P-201ENST00000364007 FAIMQ9NVQ4 179 aa-1.01□□□□□ -2.57
RNU6-560P-201ENST00000364007 KTN1Q86UP2 1357 aaKnown RBP-1.01□□□□□ -2.57
RNU6-560P-201ENST00000364007 AKAIN1P0CW23 69 aa-1.02□□□□□ -2.57
RNU6-560P-201ENST00000364007 TOP2BQ02880 1626 aa-1.02□□□□□ -2.57
RNU6-560P-201ENST00000364007 KLK9Q2XQG4 91 aa-1.02□□□□□ -2.57
RNU6-560P-201ENST00000364007 ANKRD36A6QL64 1941 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 EHBP1L1Q8N3D4 1523 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 TRBV7-4A0A0J9YYF1 115 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 LINC00959A0A1B0GUT2 108 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 C9orf153Q5TBE3 101 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 PP6455Q8WZ26 134 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 UQCR10Q9UDW1 63 aa-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 PDCD11Q14690 1871 aaKnown RBP-1.03□□□□□ -2.57
RNU6-560P-201ENST00000364007 UBA52P62987 128 aaKnown RBP-1.04□□□□□ -2.58
RNU6-560P-201ENST00000364007 ARL2-SNX15V9GYD0 113 aa-1.04□□□□□ -2.58
RNU6-560P-201ENST00000364007 XRN1Q8IZH2 1706 aaKnown RBP-1.04□□□□□ -2.58
RNU6-560P-201ENST00000364007 RNF213Q63HN8 5207 aa-1.05□□□□□ -2.58
RNU6-560P-201ENST00000364007 SPINK4O60575 86 aa-1.05□□□□□ -2.58
RNU6-560P-201ENST00000364007 ROCK2O75116 1388 aaKnown RBP-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 SETD2Q9BYW2 2564 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 UBE2L5PA0A1B0GUS4 154 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 HMGN1P05114 100 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 UBE2L3P68036 154 aaKnown RBP-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 FDCSPQ8NFU4 85 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 DEFB105AQ8NG35 78 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 C1orf54Q8WWF1 131 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 LINC01600Q96MT4 127 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 RYR2Q92736 4967 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 IQSEC2Q5JU85 1478 aa-1.06□□□□□ -2.58
RNU6-560P-201ENST00000364007 HIVEP1P15822 2718 aa-1.07□□□□□ -2.58
RNU6-560P-201ENST00000364007 BIRC6Q9NR09 4857 aa-1.07□□□□□ -2.58
RNU6-560P-201ENST00000364007 MARF1Q9Y4F3 1742 aaKnown RBP-1.07□□□□□ -2.58
RNU6-560P-201ENST00000364007 A0A0G2JMZ2 1700 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 M0R2T5 61 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 GNG11P61952 73 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 WHAMMP3Q1A5X7 153 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 LCN9Q8WX39 176 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 MYOM2P54296 1465 aa-1.08□□□□□ -2.58
RNU6-560P-201ENST00000364007 C1orf167Q5SNV9 1468 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms