RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
VPS29-201ENST00000360579 GATCO43716 136 aaKnown RBP8.27□□□□□ -1.09
VPS29-201ENST00000360579 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
VPS29-201ENST00000360579 PPP1R17O96001 155 aa8.26□□□□□ -1.09
VPS29-201ENST00000360579 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
VPS29-201ENST00000360579 CT83Q5H943 113 aa8.26□□□□□ -1.09
VPS29-201ENST00000360579 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
VPS29-201ENST00000360579 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
VPS29-201ENST00000360579 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
VPS29-201ENST00000360579 M0QXV9 152 aa8.25□□□□□ -1.09
VPS29-201ENST00000360579 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
VPS29-201ENST00000360579 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
VPS29-201ENST00000360579 A0A1B0GUT8 65 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 RAB4AP20338 218 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 Q6ZUT4 128 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 SMDT1Q9H4I9 107 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
VPS29-201ENST00000360579 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
VPS29-201ENST00000360579 RGS21Q2M5E4 152 aa8.23□□□□□ -1.09
VPS29-201ENST00000360579 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 ZNF861PO60384 105 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 TSPAN13O95857 204 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 UNQ6190/PRO20217Q6UXQ8 127 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 AMN1Q8IY45 258 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
VPS29-201ENST00000360579 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
VPS29-201ENST00000360579 TCAPO15273 167 aa8.2□□□□□ -1.1
VPS29-201ENST00000360579 KRTAP7-1Q8IUC3 87 aa8.2□□□□□ -1.1
VPS29-201ENST00000360579 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
VPS29-201ENST00000360579 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
VPS29-201ENST00000360579 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
VPS29-201ENST00000360579 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
VPS29-201ENST00000360579 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
VPS29-201ENST00000360579 NRACQ8N912 160 aa8.19□□□□□ -1.1
VPS29-201ENST00000360579 TGIF2-C20orf24A0A0A6YYL0 155 aa8.18□□□□□ -1.1
VPS29-201ENST00000360579 NUPR1O60356 82 aa8.18□□□□□ -1.1
VPS29-201ENST00000360579 SPANXA1Q9NS26 97 aa8.18□□□□□ -1.1
VPS29-201ENST00000360579 HBBP68871 147 aa8.17□□□□□ -1.1
VPS29-201ENST00000360579 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
VPS29-201ENST00000360579 RIGQ13278 110 aa8.17□□□□□ -1.1
VPS29-201ENST00000360579 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
VPS29-201ENST00000360579 C20orf78Q9BR46 151 aa8.17□□□□□ -1.1
VPS29-201ENST00000360579 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
VPS29-201ENST00000360579 CRYGAP11844 174 aa8.16□□□□□ -1.1
VPS29-201ENST00000360579 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
VPS29-201ENST00000360579 RPL39P62891 51 aaKnown RBP8.15□□□□□ -1.1
VPS29-201ENST00000360579 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.1
VPS29-201ENST00000360579 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
VPS29-201ENST00000360579 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
VPS29-201ENST00000360579 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
VPS29-201ENST00000360579 LINC00862A6NCI5 91 aa8.14□□□□□ -1.11
VPS29-201ENST00000360579 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
VPS29-201ENST00000360579 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
VPS29-201ENST00000360579 TRBV24-1A0A075B6N3 115 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 A0A087X002 238 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 CEBPGP53567 150 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 CTDSP1Q9GZU7 261 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 OSTCQ9NRP0 149 aa8.13□□□□□ -1.11
VPS29-201ENST00000360579 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
VPS29-201ENST00000360579 FAM104BQ5XKR9 115 aa8.12□□□□□ -1.11
VPS29-201ENST00000360579 LINC01551Q86U37 167 aa8.12□□□□□ -1.11
VPS29-201ENST00000360579 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
VPS29-201ENST00000360579 CKS2P33552 79 aa8.11□□□□□ -1.11
VPS29-201ENST00000360579 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
VPS29-201ENST00000360579 C2orf82Q6UX34 121 aa8.11□□□□□ -1.11
VPS29-201ENST00000360579 SMIM7Q9BQ49 75 aa8.11□□□□□ -1.11
VPS29-201ENST00000360579 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
VPS29-201ENST00000360579 ZNF727A8MUV8 499 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 H3BS24 57 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 BCE1O60756 84 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 IFI27P40305 119 aaPredicted RBP8.1□□□□□ -1.11
VPS29-201ENST00000360579 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
VPS29-201ENST00000360579 TNFRSF6BO95407 300 aa8.09□□□□□ -1.11
VPS29-201ENST00000360579 LINC00242Q5T6M2 205 aa8.09□□□□□ -1.11
VPS29-201ENST00000360579 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
VPS29-201ENST00000360579 V9GYV3 84 aa8.09□□□□□ -1.11
VPS29-201ENST00000360579 A0A1B0GW15 77 aa8.08□□□□□ -1.12
VPS29-201ENST00000360579 PRSS2P07478 247 aa8.08□□□□□ -1.12
VPS29-201ENST00000360579 BLOC1S1P78537 153 aa8.08□□□□□ -1.12
VPS29-201ENST00000360579 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
VPS29-201ENST00000360579 CKS1BP61024 79 aa8.07□□□□□ -1.12
VPS29-201ENST00000360579 CTAG1AP78358 180 aa8.07□□□□□ -1.12
VPS29-201ENST00000360579 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
VPS29-201ENST00000360579 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
VPS29-201ENST00000360579 RAB5AP20339 215 aa8.06□□□□□ -1.12
VPS29-201ENST00000360579 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
VPS29-201ENST00000360579 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
VPS29-201ENST00000360579 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
VPS29-201ENST00000360579 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
VPS29-201ENST00000360579 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
VPS29-201ENST00000360579 D6R8Y8 96 aa8.05□□□□□ -1.12
VPS29-201ENST00000360579 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms