RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 NHLRC4P0CG21 123 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-203ENST00000358528 PLA2G2AP14555 144 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 COX7B2Q8TF08 81 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 ESM1Q9NQ30 184 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 TRAV13-2A0A0B4J235 113 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 DEFB114Q30KQ6 69 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 IGLV10-54A0A075B6I4 117 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 CITED2Q99967 270 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-203ENST00000358528 TEX15Q9BXT5 2789 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 CCL24O00175 119 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 TIRAPP58753 221 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 SOSTDC1Q6X4U4 206 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 TMEM86BQ8N661 226 aa4.73□□□□□ -1.65
CSDE1-203ENST00000358528 MALP21145 153 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 HIST2H2BCQ6DN03 193 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 CFAP161Q6P656 301 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 NCR3O14931 201 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 ACYP1P07311 99 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 Q6YL49 198 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 LINC00643Q86TS7 51 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 J3QLI3 93 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 ODF3L2Q3SX64 289 aa4.72□□□□□ -1.65
CSDE1-203ENST00000358528 KLK5Q9Y337 293 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-203ENST00000358528 A0A1B0GX51 115 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 DEFB4AO15263 64 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 TIMM17BO60830 172 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 BRI3O95415 125 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 S100A7L2Q5SY68 101 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 FAM218AQ96MZ4 157 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 BSNQ9UPA5 3926 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 PF4P02776 101 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
CSDE1-203ENST00000358528 FBN2P35556 2912 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 KRTAP10-9P60411 292 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 Q6Q795 121 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 NTM-AS1Q6ZSK4 140 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 C11orf72Q8NBR9 251 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 SMIM11BQ8TCY0 68 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 C4orf3Q8WVX3 66 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 IGHV4-31P0DP07 118 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 SS18Q15532 418 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 RNF152Q8N8N0 203 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 LAMTOR3Q9UHA4 124 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 A0A087WVE0 104 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 A0A087WYN8 130 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 PRORYQ9H606 182 aa4.7□□□□□ -1.66
CSDE1-203ENST00000358528 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 hADV29S1A0JD25 119 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 GYPEP15421 78 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 PRR3P79522 188 aaKnown RBP4.69□□□□□ -1.66
CSDE1-203ENST00000358528 CELSR2Q9HCU4 2923 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 CFAP46Q8IYW2 2715 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 TRBV10-1A0A0K0K1A3 114 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 M0QXV9 152 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 TRACP01848 142 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 LINC00337Q8N6G1 96 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 FLNAP21333 2647 aaKnown RBP4.69□□□□□ -1.66
CSDE1-203ENST00000358528 GCN1Q92616 2671 aaKnown RBP4.69□□□□□ -1.66
CSDE1-203ENST00000358528 CCL18P55774 89 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 NF1P21359 2839 aa4.69□□□□□ -1.66
CSDE1-203ENST00000358528 ANGP03950 147 aaKnown RBP4.68□□□□□ -1.66
CSDE1-203ENST00000358528 SHISA2Q6UWI4 295 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 WFDC9Q8NEX5 89 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 OVOL2Q9BRP0 275 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 FAM240AA0A1B0GVK7 77 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 ORMDL1Q9P0S3 153 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 SMCR5Q8TEV8 140 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 LINC00526Q96FQ7 95 aa4.68□□□□□ -1.66
CSDE1-203ENST00000358528 HAMPP81172 84 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 H0YGX0 51 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 C16orf74Q96GX8 76 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 TRAV23DV6A0A075B6W5 121 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 LOC107984640A0A0U1RRK4 108 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 BEAN1Q3B7T3 259 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 DNAJC9-AS1A6NH13 148 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 UQCRQO14949 82 aa4.67□□□□□ -1.66
CSDE1-203ENST00000358528 IGSF10Q6WRI0 2623 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 TRBV6-8A0A0A6YYG3 113 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 ATOX1O00244 68 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 DEFB113Q30KQ7 82 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 CXCL5P42830 114 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 PPDPFQ9H3Y8 114 aa4.66□□□□□ -1.66
CSDE1-203ENST00000358528 MXRA5Q9NR99 2828 aa4.65□□□□□ -1.66
CSDE1-203ENST00000358528 C9orf116Q5BN46 136 aaPredicted RBP4.65□□□□□ -1.66
CSDE1-203ENST00000358528 ZFHX3Q15911 3703 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 ITPR3Q14573 2671 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 LINC00269Q8N2A0 174 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 IGLV5-45A0A087WSX0 123 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 TRBV7-7A0A0K0K1E9 115 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 F5H768 121 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 LRRC75A-AS1Q8N1F1 130 aa4.65□□□□□ -1.67
CSDE1-203ENST00000358528 LINC00846Q9NV44 126 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms