RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
NIPAL3-203ENST00000358028 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
NIPAL3-203ENST00000358028 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-203ENST00000358028 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
NIPAL3-203ENST00000358028 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
NIPAL3-203ENST00000358028 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 EIF4EBP3O60516 100 aaPredicted RBP10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 CIDEAO60543 219 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 PPDPFLQ8WWR9 84 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 IFITM1P13164 125 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 HERVK_113P63121 156 aa10.16□□□□□ -0.78
NIPAL3-203ENST00000358028 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.78
NIPAL3-203ENST00000358028 NDUFA1O15239 70 aa10.15□□□□□ -0.78
NIPAL3-203ENST00000358028 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
NIPAL3-203ENST00000358028 KRTAP10-11P60412 298 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 C9orf66Q5T8R8 295 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE7O76087 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE4Q13068 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 GAGE5Q13069 117 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 LINC01600Q96MT4 127 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 OVOL2Q9BRP0 275 aa10.14□□□□□ -0.79
NIPAL3-203ENST00000358028 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 PRSS2P07478 247 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 INSL3P51460 131 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 EGFEM1PQ0D2K5 195 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
NIPAL3-203ENST00000358028 TRGV2A0A075B6R0 118 aa10.12□□□□□ -0.79
NIPAL3-203ENST00000358028 Q1RN00 199 aa10.12□□□□□ -0.79
NIPAL3-203ENST00000358028 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
NIPAL3-203ENST00000358028 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
NIPAL3-203ENST00000358028 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
NIPAL3-203ENST00000358028 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 H7C423 109 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 SLC25A20O43772 301 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 LINC00694P0DN24 101 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 LINC00242Q5T6M2 205 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 COPS9Q8WXC6 57 aa10.11□□□□□ -0.79
NIPAL3-203ENST00000358028 TRBV6-4A0A1B0GX49 114 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 H7C2G1 150 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 C9JAW5 83 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 COX6CP09669 75 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
NIPAL3-203ENST00000358028 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 A8MZ25 164 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 TRIAP1O43715 76 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 COX6A2Q02221 97 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 ICOSQ9Y6W8 199 aa10.08□□□□□ -0.8
NIPAL3-203ENST00000358028 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
NIPAL3-203ENST00000358028 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 K7EIL1 84 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 HERV-K104P63124 156 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 CDIP1Q9H305 208 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 UBE2L6O14933 153 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 FHL2Q14192 279 aa10.06□□□□□ -0.8
NIPAL3-203ENST00000358028 Q9H8V8 135 aa10.05□□□□□ -0.8
NIPAL3-203ENST00000358028 MRAPQ8TCY5 172 aa10.04□□□□□ -0.8
NIPAL3-203ENST00000358028 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
NIPAL3-203ENST00000358028 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 F5H768 121 aa10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 LINC00308Q8TCZ7 52 aa10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
NIPAL3-203ENST00000358028 H3BT86 120 aa10.02□□□□□ -0.81
NIPAL3-203ENST00000358028 DNAH9Q9NYC9 4486 aa10.02□□□□□ -0.81
NIPAL3-203ENST00000358028 X6R8D5 127 aa10.01□□□□□ -0.81
NIPAL3-203ENST00000358028 LST1O00453 97 aa10.01□□□□□ -0.81
NIPAL3-203ENST00000358028 NPC2P61916 151 aa10.01□□□□□ -0.81
NIPAL3-203ENST00000358028 SMIM9A6NGZ8 99 aa10□□□□□ -0.81
NIPAL3-203ENST00000358028 DEFB130BP0DP73 79 aa10□□□□□ -0.81
NIPAL3-203ENST00000358028 DEFB130AP0DP74 79 aa10□□□□□ -0.81
NIPAL3-203ENST00000358028 GAGE6Q13070 117 aa10□□□□□ -0.81
NIPAL3-203ENST00000358028 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
NIPAL3-203ENST00000358028 DEFB121Q5J5C9 76 aa9.99□□□□□ -0.81
NIPAL3-203ENST00000358028 MEIG1Q5JSS6 88 aa9.98□□□□□ -0.81
NIPAL3-203ENST00000358028 DAND5Q8N907 189 aa9.98□□□□□ -0.81
NIPAL3-203ENST00000358028 NTN5Q8WTR8 489 aaPredicted RBP9.98□□□□□ -0.81
NIPAL3-203ENST00000358028 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
NIPAL3-203ENST00000358028 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
NIPAL3-203ENST00000358028 XGP55808 180 aa9.96□□□□□ -0.81
NIPAL3-203ENST00000358028 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.81
NIPAL3-203ENST00000358028 A0A1B0GV72 72 aa9.96□□□□□ -0.82
NIPAL3-203ENST00000358028 COX7B2Q8TF08 81 aa9.96□□□□□ -0.82
NIPAL3-203ENST00000358028 IGLV4-60A0A075B6I1 120 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms