RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
CCNE1-202ENST00000357943 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
CCNE1-202ENST00000357943 ATP5LO75964 103 aa9.91□□□□□ -0.82
CCNE1-202ENST00000357943 NPSP0C0P6 89 aa9.91□□□□□ -0.82
CCNE1-202ENST00000357943 PET117Q6UWS5 81 aa9.91□□□□□ -0.82
CCNE1-202ENST00000357943 Q6ZN92 141 aa9.91□□□□□ -0.82
CCNE1-202ENST00000357943 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 EREGO14944 169 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 AMELXQ99217 191 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 VCX2Q9H322 139 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
CCNE1-202ENST00000357943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
CCNE1-202ENST00000357943 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
CCNE1-202ENST00000357943 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
CCNE1-202ENST00000357943 CHCHD10Q8WYQ3 142 aaPredicted RBP9.89□□□□□ -0.83
CCNE1-202ENST00000357943 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
CCNE1-202ENST00000357943 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
CCNE1-202ENST00000357943 RMI2Q96E14 147 aa9.89□□□□□ -0.83
CCNE1-202ENST00000357943 PKD1P98161 4303 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 H0Y8G0 127 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 CCL25O15444 150 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 DLEU1O43261 78 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 PSCAO43653 123 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 XCL1P47992 114 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 TM2D2Q9BX73 214 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 COX11Q9Y6N1 276 aa9.88□□□□□ -0.83
CCNE1-202ENST00000357943 PRSS29PA6NIE9 313 aa9.87□□□□□ -0.83
CCNE1-202ENST00000357943 SS18Q15532 418 aa9.87□□□□□ -0.83
CCNE1-202ENST00000357943 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
CCNE1-202ENST00000357943 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
CCNE1-202ENST00000357943 UBE2D1P51668 147 aa9.86□□□□□ -0.83
CCNE1-202ENST00000357943 PRSS1P07477 247 aa9.85□□□□□ -0.83
CCNE1-202ENST00000357943 TNP2Q05952 138 aa9.85□□□□□ -0.83
CCNE1-202ENST00000357943 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
CCNE1-202ENST00000357943 PMVKQ15126 192 aa9.85□□□□□ -0.83
CCNE1-202ENST00000357943 CBY1Q9Y3M2 126 aa9.85□□□□□ -0.83
CCNE1-202ENST00000357943 COX6A2Q02221 97 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 FOXI1Q12951 378 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 WFDC2Q14508 124 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 ODF1Q14990 250 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 PAM16Q9Y3D7 125 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
CCNE1-202ENST00000357943 LRCOL1A6NCL2 159 aa9.83□□□□□ -0.84
CCNE1-202ENST00000357943 LECT2O14960 151 aa9.83□□□□□ -0.84
CCNE1-202ENST00000357943 SPATA45Q537H7 98 aa9.83□□□□□ -0.84
CCNE1-202ENST00000357943 PKHD1P08F94 4074 aa9.83□□□□□ -0.84
CCNE1-202ENST00000357943 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
CCNE1-202ENST00000357943 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
CCNE1-202ENST00000357943 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
CCNE1-202ENST00000357943 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
CCNE1-202ENST00000357943 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
CCNE1-202ENST00000357943 EPPK1P58107 5090 aaKnown RBP9.81□□□□□ -0.84
CCNE1-202ENST00000357943 A0A087WTM6 91 aa9.81□□□□□ -0.84
CCNE1-202ENST00000357943 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
CCNE1-202ENST00000357943 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
CCNE1-202ENST00000357943 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
CCNE1-202ENST00000357943 ORAOV1Q8WV07 137 aa9.81□□□□□ -0.84
CCNE1-202ENST00000357943 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
CCNE1-202ENST00000357943 MAJINQ3KP22 176 aa9.79□□□□□ -0.84
CCNE1-202ENST00000357943 MRPL35Q9NZE8 188 aaKnown RBP9.79□□□□□ -0.84
CCNE1-202ENST00000357943 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 COX7A2LO14548 114 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 HERVK_113P63121 156 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 SEC11AP67812 179 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
CCNE1-202ENST00000357943 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 F8VRH5 84 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 DPM2O94777 84 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 IGKCP01834 107 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 GEMIN7Q9H840 131 aaKnown RBP9.78□□□□□ -0.84
CCNE1-202ENST00000357943 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
CCNE1-202ENST00000357943 MALP21145 153 aa9.77□□□□□ -0.85
CCNE1-202ENST00000357943 DYNC1H1Q14204 4646 aaKnown RBP9.77□□□□□ -0.85
CCNE1-202ENST00000357943 A0A087WZ39 114 aa9.76□□□□□ -0.85
CCNE1-202ENST00000357943 Q8N814 137 aa9.76□□□□□ -0.85
CCNE1-202ENST00000357943 CHAC1Q9BUX1 264 aa9.76□□□□□ -0.85
CCNE1-202ENST00000357943 IGLV5-45A0A087WSX0 123 aa9.75□□□□□ -0.85
CCNE1-202ENST00000357943 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
CCNE1-202ENST00000357943 PLNP26678 52 aa9.75□□□□□ -0.85
CCNE1-202ENST00000357943 LRP1BQ9NZR2 4599 aa9.75□□□□□ -0.85
CCNE1-202ENST00000357943 HSBP1L1C9JCN9 74 aa9.74□□□□□ -0.85
CCNE1-202ENST00000357943 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
CCNE1-202ENST00000357943 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.74□□□□□ -0.85
CCNE1-202ENST00000357943 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
CCNE1-202ENST00000357943 A0A1B0GVY2 172 aa9.74□□□□□ -0.85
CCNE1-202ENST00000357943 FUSP35637 526 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCNE1-202ENST00000357943 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
CCNE1-202ENST00000357943 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
CCNE1-202ENST00000357943 BATFQ16520 125 aa9.73□□□□□ -0.85
CCNE1-202ENST00000357943 STPG4Q8N801 248 aa9.73□□□□□ -0.85
CCNE1-202ENST00000357943 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
CCNE1-202ENST00000357943 APOMO95445 188 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms