RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 LINC00310P59036 64 aa3.46□□□□□ -1.86
SYNE2-203ENST00000357395 LY6EQ16553 131 aa3.46□□□□□ -1.86
SYNE2-203ENST00000357395 DNAJC9-AS1A6NH13 148 aa3.46□□□□□ -1.86
SYNE2-203ENST00000357395 GNRH2O43555 120 aa3.46□□□□□ -1.86
SYNE2-203ENST00000357395 C5orf56Q8N8D9 126 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 RITA1Q96K30 269 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 FBXL19-AS1Q494R0 122 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 Q6ZRU5 148 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 DEFB104AQ8WTQ1 72 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 NANOS2P60321 138 aaKnown RBP3.45□□□□□ -1.86
SYNE2-203ENST00000357395 SMIM11BQ8TCY0 68 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 NUP210LQ5VU65 1888 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-203ENST00000357395 Q8N2B8 174 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 CDKN2A-AS1Q9UH64 79 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 A0A1B0GU69 56 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 COL11A2P13942 1736 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-203ENST00000357395 LOC101927531A0A1B0GV80 90 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 CTSZQ9UBR2 303 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 SNURFQ9Y675 71 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 TFF2Q03403 129 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 C10orf25Q5T742 122 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 C9orf66Q5T8R8 295 aa3.45□□□□□ -1.86
SYNE2-203ENST00000357395 RPL39P62891 51 aaKnown RBP3.44□□□□□ -1.86
SYNE2-203ENST00000357395 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 NOP10Q9NPE3 64 aaKnown RBP3.44□□□□□ -1.86
SYNE2-203ENST00000357395 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 SPATA3Q8NHX4 192 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 CENPFP49454 3210 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-203ENST00000357395 IGKV2-29A2NJV5 120 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-203ENST00000357395 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-203ENST00000357395 ATP1A1-AS1Q5TC04 95 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 IGHV4-59P01825 116 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 LINC01560Q8TB33 94 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 TRAV22A0A0B4J277 110 aa3.44□□□□□ -1.86
SYNE2-203ENST00000357395 CGB3P0DN86 165 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 CGB7P0DN87 165 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 Q6ZQY7 126 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 GYPEP15421 78 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 MOBPQ13875 183 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 CDC42SE2Q9NRR3 84 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 ODF3L1Q8IXM7 274 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 E7EUB6 86 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 LINC00482Q8N8I6 264 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 TFF1P04155 84 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 TRBV7-4A0A0J9YYF1 115 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 PRB3Q04118 309 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-203ENST00000357395 LINC00575Q6W349 94 aa3.43□□□□□ -1.86
SYNE2-203ENST00000357395 CHCHD10Q8WYQ3 142 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-203ENST00000357395 DEFB130BP0DP73 79 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 DEFB130AP0DP74 79 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 LELP1Q5T871 98 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 PINLYPA6NC86 204 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 ODF3BA8MYP8 253 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 TSHBP01222 138 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 C1orf137Q5JT78 98 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 CRIP1P50238 77 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 LINC00846Q9NV44 126 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 IGFL2Q6UWQ7 119 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 Q9BRP9 147 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 REG3AQ06141 175 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 Q6ZQT7 251 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 SMAD5-AS1Q9Y6J3 95 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 WDR90Q96KV7 1748 aa3.42□□□□□ -1.86
SYNE2-203ENST00000357395 PSPHP1O15172 72 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 ZNF295-AS1Q8N0V1 137 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 ZNF702PQ9H963 129 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 ANKRD17O75179 2603 aaKnown RBP3.41□□□□□ -1.86
SYNE2-203ENST00000357395 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 PROK2Q9HC23 129 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 HTN3P15516 51 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 DEFB124Q8NES8 71 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 KPRPQ5T749 579 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-203ENST00000357395 Q8N9W7 124 aa3.41□□□□□ -1.86
SYNE2-203ENST00000357395 TRAV10A0A0B4J240 114 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 CENPEQ02224 2701 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 GVQW2A0A096LPI5 108 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-203ENST00000357395 Q6ZQT0 140 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 E7EQL1 145 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 LINC00242Q5T6M2 205 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 USP24Q9UPU5 2620 aa3.4□□□□□ -1.86
SYNE2-203ENST00000357395 DMAC1Q96GE9 116 aa3.4□□□□□ -1.87
SYNE2-203ENST00000357395 TNFRSF13BO14836 293 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-203ENST00000357395 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
SYNE2-203ENST00000357395 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
SYNE2-203ENST00000357395 Q6ZSV7 163 aa3.4□□□□□ -1.87
SYNE2-203ENST00000357395 DEFB105AQ8NG35 78 aa3.4□□□□□ -1.87
SYNE2-203ENST00000357395 COL4A6Q14031 1691 aa3.4□□□□□ -1.87
SYNE2-203ENST00000357395 H7BZZ5 65 aa3.39□□□□□ -1.87
SYNE2-203ENST00000357395 PRB4P10163 310 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms