RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HECTD1Q9ULT8 2610 aa8.68□□□□□ -1.02
COL9A1-202ENST00000357250 CPAMD8Q8IZJ3 1885 aa8.68□□□□□ -1.02
COL9A1-202ENST00000357250 DEFB131BA0A096LNP1 70 aa8.68□□□□□ -1.02
COL9A1-202ENST00000357250 CRYGDP07320 174 aa8.67□□□□□ -1.02
COL9A1-202ENST00000357250 ZNF580Q9UK33 172 aa8.67□□□□□ -1.02
COL9A1-202ENST00000357250 TEX49A0A1B0GTD5 131 aa8.67□□□□□ -1.02
COL9A1-202ENST00000357250 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
COL9A1-202ENST00000357250 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
COL9A1-202ENST00000357250 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
COL9A1-202ENST00000357250 RBX1P62877 108 aa8.66□□□□□ -1.02
COL9A1-202ENST00000357250 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
COL9A1-202ENST00000357250 COX8CQ7Z4L0 72 aa8.66□□□□□ -1.02
COL9A1-202ENST00000357250 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
COL9A1-202ENST00000357250 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
COL9A1-202ENST00000357250 COX17Q14061 63 aa8.65□□□□□ -1.02
COL9A1-202ENST00000357250 Q6ZS46 218 aa8.65□□□□□ -1.02
COL9A1-202ENST00000357250 LST1O00453 97 aa8.65□□□□□ -1.03
COL9A1-202ENST00000357250 LELP1Q5T871 98 aa8.65□□□□□ -1.03
COL9A1-202ENST00000357250 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.03
COL9A1-202ENST00000357250 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 MAP1AP78559 2803 aaPredicted RBP8.64□□□□□ -1.03
COL9A1-202ENST00000357250 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
COL9A1-202ENST00000357250 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 PRR9Q5T870 116 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 COL4A2P08572 1712 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
COL9A1-202ENST00000357250 H0Y9J4 135 aa8.63□□□□□ -1.03
COL9A1-202ENST00000357250 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
COL9A1-202ENST00000357250 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
COL9A1-202ENST00000357250 UBE2D1P51668 147 aa8.63□□□□□ -1.03
COL9A1-202ENST00000357250 KRTAP10-9P60411 292 aa8.63□□□□□ -1.03
COL9A1-202ENST00000357250 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 SPEGQ15772 3267 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 COL5A1P20908 1838 aaPredicted RBP8.62□□□□□ -1.03
COL9A1-202ENST00000357250 DHRS4-AS1Q9P1J3 65 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 COL6A3P12111 3177 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 M0R378 163 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 EYSQ5T1H1 3165 aa8.62□□□□□ -1.03
COL9A1-202ENST00000357250 NDUFC1O43677 76 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 AVPP01185 164 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 IGIPA6NJ69 53 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 UBE2D3P61077 147 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 UBE2D2P62837 147 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 IGKV2-24A0A0C4DH68 120 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
COL9A1-202ENST00000357250 Q8IZM0 81 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 Q8N976 141 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 RNF183Q96D59 192 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 PROK1P58294 105 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
COL9A1-202ENST00000357250 NDUFA7O95182 113 aa8.6□□□□□ -1.03
COL9A1-202ENST00000357250 BBC3Q96PG8 261 aaPredicted RBP8.6□□□□□ -1.03
COL9A1-202ENST00000357250 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
COL9A1-202ENST00000357250 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
COL9A1-202ENST00000357250 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
COL9A1-202ENST00000357250 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
COL9A1-202ENST00000357250 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
COL9A1-202ENST00000357250 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
COL9A1-202ENST00000357250 CDC42SE2Q9NRR3 84 aa8.59□□□□□ -1.03
COL9A1-202ENST00000357250 ZNF292O60281 2723 aa8.58□□□□□ -1.04
COL9A1-202ENST00000357250 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
COL9A1-202ENST00000357250 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
COL9A1-202ENST00000357250 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
COL9A1-202ENST00000357250 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
COL9A1-202ENST00000357250 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
COL9A1-202ENST00000357250 LINC00310P59036 64 aa8.57□□□□□ -1.04
COL9A1-202ENST00000357250 SEC61GP60059 68 aa8.57□□□□□ -1.04
COL9A1-202ENST00000357250 DSPP15924 2871 aaKnown RBP8.57□□□□□ -1.04
COL9A1-202ENST00000357250 RAI1Q7Z5J4 1906 aaPredicted RBP8.57□□□□□ -1.04
COL9A1-202ENST00000357250 CCKP06307 115 aa8.57□□□□□ -1.04
COL9A1-202ENST00000357250 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
COL9A1-202ENST00000357250 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
COL9A1-202ENST00000357250 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
COL9A1-202ENST00000357250 KPRPQ5T749 579 aaPredicted RBP8.56□□□□□ -1.04
COL9A1-202ENST00000357250 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
COL9A1-202ENST00000357250 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
COL9A1-202ENST00000357250 SLPIP03973 132 aa8.56□□□□□ -1.04
COL9A1-202ENST00000357250 A0A087WZ39 114 aa8.55□□□□□ -1.04
COL9A1-202ENST00000357250 Q6ZQY7 126 aa8.55□□□□□ -1.04
COL9A1-202ENST00000357250 Q6Q795 121 aa8.55□□□□□ -1.04
COL9A1-202ENST00000357250 C18orf65Q6ZTR6 163 aa8.55□□□□□ -1.04
COL9A1-202ENST00000357250 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
COL9A1-202ENST00000357250 PCSK5Q92824 1860 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 LY6G6DO95868 133 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 IGKV4-1P06312 121 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 USP17L23D6RBM5 183 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 SMIM11BQ8TCY0 68 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 V9GYY9 64 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
COL9A1-202ENST00000357250 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
COL9A1-202ENST00000357250 GAS8-AS1O95177 125 aa8.53□□□□□ -1.04
COL9A1-202ENST00000357250 EDN2P20800 178 aa8.53□□□□□ -1.04
COL9A1-202ENST00000357250 Q6JHZ5 121 aa8.53□□□□□ -1.04
COL9A1-202ENST00000357250 A8MZ25 164 aa8.53□□□□□ -1.04
COL9A1-202ENST00000357250 PRM2P04554 102 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms