RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DEFB131AP59861 70 aa4.8□□□□□ -1.64
TRIM38-201ENST00000357085 F8W735 103 aaPredicted RBP4.8□□□□□ -1.64
TRIM38-201ENST00000357085 CFHR3Q02985 330 aa4.8□□□□□ -1.64
TRIM38-201ENST00000357085 PLAC8L1A1L4L8 177 aa4.8□□□□□ -1.64
TRIM38-201ENST00000357085 LY6G6DO95868 133 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 Q6ZSV7 163 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 LITAFQ99732 161 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 ESRGQ1W209 222 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 IGHV4-59P01825 116 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 OBSCN-AS1Q96MR7 158 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 CHD8Q9HCK8 2581 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 LINC00846Q9NV44 126 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 A8MZ25 164 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 NTM-AS1Q6ZSK4 140 aa4.79□□□□□ -1.64
TRIM38-201ENST00000357085 TMEM254Q8TBM7 123 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 EP400Q96L91 3159 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 BPESC1Q9GZL8 116 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 K7ENP7 123 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 APOC4P55056 127 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 LINC00242Q5T6M2 205 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 WFDC9Q8NEX5 89 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 A6NDX4 124 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
TRIM38-201ENST00000357085 H3BPC8 53 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 PRYO14603 147 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 FHL2Q14192 279 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 A0A087WYN8 130 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 ZFYVE26Q68DK2 2539 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 ZNF462Q96JM2 2506 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 UNQ9165/PRO28630Q6UXU0 137 aa4.77□□□□□ -1.65
TRIM38-201ENST00000357085 LINC00315P59091 139 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 SMIM11BQ8TCY0 68 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 SLPIP03973 132 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 DEFB1P60022 68 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 CCL18P55774 89 aa4.76□□□□□ -1.65
TRIM38-201ENST00000357085 LINC00482Q8N8I6 264 aa4.75□□□□□ -1.65
TRIM38-201ENST00000357085 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
TRIM38-201ENST00000357085 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
TRIM38-201ENST00000357085 ZNF73O43830 326 aaPredicted RBP4.75□□□□□ -1.65
TRIM38-201ENST00000357085 PRR15LQ9BU68 103 aa4.75□□□□□ -1.65
TRIM38-201ENST00000357085 RETNQ9HD89 108 aa4.75□□□□□ -1.65
TRIM38-201ENST00000357085 HILS1P60008 231 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 TRANK1O15050 2925 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 C9orf66Q5T8R8 295 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 C11orf71Q6IPW1 123 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 TRBV6-8A0A0A6YYG3 113 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 FAM19A1Q7Z5A9 133 aa4.74□□□□□ -1.65
TRIM38-201ENST00000357085 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 RNF223E7ERA6 249 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 Q5XG85 94 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 ZFP36P26651 326 aaKnown RBP4.73□□□□□ -1.65
TRIM38-201ENST00000357085 MAP6D1Q9H9H5 199 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 LINC00337Q8N6G1 96 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 LINC00167Q96N53 147 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 PRB1P04280 392 aa4.73□□□□□ -1.65
TRIM38-201ENST00000357085 FAM218AQ96MZ4 157 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
TRIM38-201ENST00000357085 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
TRIM38-201ENST00000357085 SOSTDC1Q6X4U4 206 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 Q8N2B8 174 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 Q8N3U1 123 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 SPAG11BQ08648 103 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 LY6HO94772 140 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 BRD3OSQ6XYD6 125 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 GYPEP15421 78 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 ESM1Q9NQ30 184 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 RPL37AP8A6NKH3 93 aa4.72□□□□□ -1.65
TRIM38-201ENST00000357085 hDV103S1A0JD37 113 aa4.71□□□□□ -1.65
TRIM38-201ENST00000357085 M0R378 163 aa4.71□□□□□ -1.65
TRIM38-201ENST00000357085 PRO0255Q9UI72 69 aa4.71□□□□□ -1.65
TRIM38-201ENST00000357085 NOTCH2Q04721 2471 aa4.71□□□□□ -1.66
TRIM38-201ENST00000357085 LMO4P61968 165 aa4.71□□□□□ -1.66
TRIM38-201ENST00000357085 LINC00575Q6W349 94 aa4.71□□□□□ -1.66
TRIM38-201ENST00000357085 EPG5Q9HCE0 2579 aa4.71□□□□□ -1.66
TRIM38-201ENST00000357085 A0A1W2PNU3 283 aaPredicted RBP4.71□□□□□ -1.66
TRIM38-201ENST00000357085 CELA1Q9UNI1 258 aa4.7□□□□□ -1.66
TRIM38-201ENST00000357085 SRCAPQ6ZRS2 3230 aa4.7□□□□□ -1.66
TRIM38-201ENST00000357085 ANGP03950 147 aaKnown RBP4.7□□□□□ -1.66
TRIM38-201ENST00000357085 ETDCA0A1B0GVM5 59 aa4.7□□□□□ -1.66
TRIM38-201ENST00000357085 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
TRIM38-201ENST00000357085 C1orf158Q8N1D5 194 aa4.7□□□□□ -1.66
TRIM38-201ENST00000357085 A8MTW9 85 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 CD164Q04900 197 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 H7BZZ5 65 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 ELOF1P60002 83 aaKnown RBP4.69□□□□□ -1.66
TRIM38-201ENST00000357085 CAMK2N2Q96S95 79 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 Q6ZQT0 140 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 REG3AQ06141 175 aa4.69□□□□□ -1.66
TRIM38-201ENST00000357085 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
TRIM38-201ENST00000357085 EGFEM1PQ0D2K5 195 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 SCXQ7RTU7 201 aa4.68□□□□□ -1.66
TRIM38-201ENST00000357085 DEFB130BP0DP73 79 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms