RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 GAGE12HA6NDE8 117 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 LINC01549A6NIU2 74 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 USP17L23D6RBM5 183 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 IFI27P40305 119 aaPredicted RBP2.61□□□□□ -1.99
CNOT4-202ENST00000356162 RPL39P62891 51 aaKnown RBP2.61□□□□□ -1.99
CNOT4-202ENST00000356162 SS18Q15532 418 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 CBLN2Q8IUK8 224 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 CHCHD10Q8WYQ3 142 aaPredicted RBP2.61□□□□□ -1.99
CNOT4-202ENST00000356162 PYGO1Q9Y3Y4 419 aa2.61□□□□□ -1.99
CNOT4-202ENST00000356162 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
CNOT4-202ENST00000356162 IGLV10-54A0A075B6I4 117 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 IGKV3OR2-268A0A0C4DH90 116 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 LINC00959A0A1B0GUT2 108 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 C2orf66Q6UXQ4 117 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 FA2HQ7L5A8 372 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 IGLV4-3A0A075B6K6 122 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 LECT2O14960 151 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 FOXI1Q12951 378 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 CD164L2Q6UWJ8 174 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 PRSS3P2Q8NHM4 247 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 TMEM141Q96I45 108 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 TIMM17AQ99595 171 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 RYR1P21817 5038 aa2.6□□□□□ -1.99
CNOT4-202ENST00000356162 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
CNOT4-202ENST00000356162 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 IFITM10A6NMD0 228 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 CDK2AP2O75956 126 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 GCSHP23434 173 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 PAPPA-AS1Q5QFB9 102 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 Q6ZN92 141 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 C15orf56Q8N910 161 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 C18orf32Q8TCD1 76 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 TOMM6Q96B49 74 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 C2orf88Q9BSF0 95 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 HERC2O95714 4834 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
CNOT4-202ENST00000356162 GVQW2A0A096LPI5 108 aaPredicted RBP2.59□□□□□ -1.99
CNOT4-202ENST00000356162 C1orf196B1AJZ1 125 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 PRSS1P07477 247 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 XCL1P47992 114 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 RAB5BP61020 215 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
CNOT4-202ENST00000356162 LBHQ53QV2 105 aaPredicted RBP2.59□□□□□ -1.99
CNOT4-202ENST00000356162 RNASE13Q5GAN3 156 aaKnown RBP2.59□□□□□ -1.99
CNOT4-202ENST00000356162 TEX43Q6ZNM6 134 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 FAM104AQ969W3 186 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 AMELXQ99217 191 aa2.59□□□□□ -1.99
CNOT4-202ENST00000356162 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 IGIPA6NJ69 53 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 COX7A2LO14548 114 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 KRTAP10-1P60331 282 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 PKIGQ9Y2B9 76 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 hDV102S1A0JD36 115 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 APOMO95445 188 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 HBDP02042 147 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 FUSP35637 526 aaKnown RBP eCLIP2.58□□□□□ -2
CNOT4-202ENST00000356162 UBE2D1P51668 147 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 LINC00173Q6ZV60 143 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 ERASQ7Z444 233 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 LINC01561Q8N1V8 128 aa2.58□□□□□ -2
CNOT4-202ENST00000356162 OPRPNQ99935 248 aaPredicted RBP2.58□□□□□ -2
CNOT4-202ENST00000356162 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.57□□□□□ -2
CNOT4-202ENST00000356162 COLCA2A8K830 154 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 F8WDY8 70 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 LINC00614P0C842 121 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 SEC11AP67812 179 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 Q6ZSA8 131 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 OR10D4PQ8NGN7 298 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 CHCHD1Q96BP2 118 aaKnown RBP2.57□□□□□ -2
CNOT4-202ENST00000356162 URB1-AS1Q96HZ7 61 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 VCX2Q9H322 139 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 HSPG2P98160 4391 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 A0A096LNJ9 63 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 HIGD2BQ4VC39 106 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 PDZD11Q5EBL8 140 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 C9orf163Q8N9P6 203 aa2.57□□□□□ -2
CNOT4-202ENST00000356162 IGHV3-64A0A075B6Q5 118 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 A0A087WZ39 114 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 IGHV3OR16-9A0A0B4J2B5 98 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 B5MCH6 92 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 ATP5LO75964 103 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 TRGC2P03986 189 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 HERVK_113P63121 156 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 SPAG11BQ08648 103 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 LINC00242Q5T6M2 205 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 C2orf48Q96LS8 159 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 CARD19Q96LW7 228 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
CNOT4-202ENST00000356162 SCO1O75880 301 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 S100A1P23297 94 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 PMVKQ15126 192 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 ZC2HC1BQ5TFG8 222 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 C5orf38Q86SI9 138 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
CNOT4-202ENST00000356162 IGLV4-69A0A075B6H9 119 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms