RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 C16orf92Q96LL3 132 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 RNF5Q99942 180 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 MAP1LC3CQ9BXW4 147 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 IGKCP01834 107 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 SLC25A29Q8N8R3 303 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 ATP6V0BQ99437 205 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 CMC4P56277 68 aaPredicted RBP3.8□□□□□ -1.8
CD47-201ENST00000355354 TRAV13-1A0A0B4J241 112 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 H3BMM0 161 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 LINC00612Q8N6U2 182 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 CHCHD5Q9BSY4 110 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 SMPXQ9UHP9 88 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 C9JAW5 83 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 ATP5L2Q7Z4Y8 100 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 CSNK1G2-AS1Q8NCQ2 148 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 TMEM263Q8WUH6 116 aaKnown RBP3.79□□□□□ -1.8
CD47-201ENST00000355354 TMEM101Q96IK0 257 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 H3BRM9 83 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 I3L3M4 83 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 C5orf38Q86SI9 138 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 CHCHD1Q96BP2 118 aaKnown RBP3.79□□□□□ -1.8
CD47-201ENST00000355354 K7EMT4 169 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 C9orf85Q96MD7 179 aa3.79□□□□□ -1.8
CD47-201ENST00000355354 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
CD47-201ENST00000355354 PANO1I0J062 215 aa3.78□□□□□ -1.8
CD47-201ENST00000355354 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
CD47-201ENST00000355354 TOMM6Q96B49 74 aa3.78□□□□□ -1.81
CD47-201ENST00000355354 SCGB3A1Q96QR1 104 aa3.78□□□□□ -1.81
CD47-201ENST00000355354 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 FAM110AQ9BQ89 295 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
CD47-201ENST00000355354 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 MINOS1-NBL1R4GNA1 71 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 J3QQQ9 107 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 DAZ2Q13117 558 aaKnown RBP3.77□□□□□ -1.81
CD47-201ENST00000355354 DAZ4Q86SG3 579 aaKnown RBP3.77□□□□□ -1.81
CD47-201ENST00000355354 DAZ1Q9NQZ3 744 aaKnown RBP3.77□□□□□ -1.81
CD47-201ENST00000355354 DAZ3Q9NR90 486 aaKnown RBP3.77□□□□□ -1.81
CD47-201ENST00000355354 UBE2D4Q9Y2X8 147 aa3.77□□□□□ -1.81
CD47-201ENST00000355354 MYMXA0A1B0GTQ4 84 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
CD47-201ENST00000355354 OXLD1Q5BKU9 147 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 TMEM223A0PJW6 202 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 F5H697 171 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 PSMB2P49721 201 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 LAGE3Q14657 143 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 FAM19A1Q7Z5A9 133 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
CD47-201ENST00000355354 LCE6AA0A183 80 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 PHLDA3Q9Y5J5 127 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 SNCGO76070 127 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 RPL35AP18077 110 aaKnown RBP3.75□□□□□ -1.81
CD47-201ENST00000355354 C1QTNF4Q9BXJ3 329 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 TRBV7-9A0A0J9YWB2 115 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 RHODO00212 210 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 DPM2O94777 84 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 RPL7P18124 248 aaKnown RBP3.75□□□□□ -1.81
CD47-201ENST00000355354 HAMPP81172 84 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 SMIM13P0DJ93 91 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 RHOHQ15669 191 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 METTL26Q96S19 204 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 XAGE1AQ9HD64 81 aa3.75□□□□□ -1.81
CD47-201ENST00000355354 FAM159AQ6UWV7 190 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 NOP10Q9NPE3 64 aaKnown RBP3.74□□□□□ -1.81
CD47-201ENST00000355354 TRAV9-1A0A075B6T8 112 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 A0A1B0GW15 77 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 RIGQ13278 110 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 VSIG2Q96IQ7 327 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 TRGV11A0A075B6L2 103 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 SBSPONQ8IVN8 264 aa3.74□□□□□ -1.81
CD47-201ENST00000355354 IGHV3OR16-9A0A0B4J2B5 98 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 OR11H12B2RN74 326 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 LECT2O14960 151 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 SIVA1O15304 175 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 FAM222AQ5U5X8 452 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 PEF1Q9UBV8 284 aaKnown RBP3.73□□□□□ -1.81
CD47-201ENST00000355354 PYGO1Q9Y3Y4 419 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 PDE6HQ13956 83 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 RASL11AQ6T310 242 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 PPP1R17O96001 155 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 DYNLRB2Q8TF09 96 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 PEMTQ9UBM1 199 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 FAM168BA1KXE4 195 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 GAGE12JA6NER3 117 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 NCR3O14931 201 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 S100A4P26447 101 aaKnown RBP3.73□□□□□ -1.81
CD47-201ENST00000355354 PFN2P35080 140 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 GAGE4Q13068 117 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 GAGE5Q13069 117 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 GAGE13Q4V321 117 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms