RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 FSHBP01225 129 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 CRPP02741 224 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 PLA2G2AP14555 144 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 Q9HAA7 133 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
TRAF3-202ENST00000351691 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
TRAF3-202ENST00000351691 UBE2E2Q96LR5 201 aa10.7□□□□□ -0.7
TRAF3-202ENST00000351691 USP17L23D6RBM5 183 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 Q6YL49 198 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 F5H768 121 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 Q9UF83 564 aa10.69□□□□□ -0.7
TRAF3-202ENST00000351691 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
TRAF3-202ENST00000351691 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
TRAF3-202ENST00000351691 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
TRAF3-202ENST00000351691 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
TRAF3-202ENST00000351691 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
TRAF3-202ENST00000351691 RS1O15537 224 aa10.67□□□□□ -0.7
TRAF3-202ENST00000351691 NDUFC2O95298 119 aa10.67□□□□□ -0.7
TRAF3-202ENST00000351691 S100A7L2Q5SY68 101 aa10.67□□□□□ -0.7
TRAF3-202ENST00000351691 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
TRAF3-202ENST00000351691 APCP25054 2843 aa10.67□□□□□ -0.7
TRAF3-202ENST00000351691 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 OXTP01178 125 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 J3QKU1 62 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 Q5XG85 94 aa10.66□□□□□ -0.7
TRAF3-202ENST00000351691 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
TRAF3-202ENST00000351691 CR1P17927 2039 aa10.65□□□□□ -0.7
TRAF3-202ENST00000351691 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-202ENST00000351691 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
TRAF3-202ENST00000351691 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.78e-8■■■■■ 31.6
TRAF3-202ENST00000351691 A0A087WYN8 130 aa10.65□□□□□ -0.71
TRAF3-202ENST00000351691 DSCR8Q96T75 97 aa10.65□□□□□ -0.71
TRAF3-202ENST00000351691 IGKV2-28A0A075B6P5 120 aa10.64□□□□□ -0.71
TRAF3-202ENST00000351691 IGKV2D-28P01615 120 aa10.64□□□□□ -0.71
TRAF3-202ENST00000351691 SMIM11BQ8TCY0 68 aa10.64□□□□□ -0.71
TRAF3-202ENST00000351691 ZANQ9Y493 2812 aa10.64□□□□□ -0.71
TRAF3-202ENST00000351691 C9orf129Q5T035 196 aaKnown RBP10.64□□□□□ -0.71
TRAF3-202ENST00000351691 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
TRAF3-202ENST00000351691 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
TRAF3-202ENST00000351691 MRAPQ8TCY5 172 aa10.63□□□□□ -0.71
TRAF3-202ENST00000351691 CCKP06307 115 aa10.62□□□□□ -0.71
TRAF3-202ENST00000351691 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
TRAF3-202ENST00000351691 A0A087WVE0 104 aa10.62□□□□□ -0.71
TRAF3-202ENST00000351691 HTN1P15515 57 aa10.61□□□□□ -0.71
TRAF3-202ENST00000351691 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
TRAF3-202ENST00000351691 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
TRAF3-202ENST00000351691 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-202ENST00000351691 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
TRAF3-202ENST00000351691 MAPK1IP1LQ8NDC0 245 aa10.61□□□□□ -0.71
TRAF3-202ENST00000351691 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
TRAF3-202ENST00000351691 BCE1O60756 84 aa10.6□□□□□ -0.71
TRAF3-202ENST00000351691 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
TRAF3-202ENST00000351691 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
TRAF3-202ENST00000351691 TRBV10-1A0A0K0K1A3 114 aa10.59□□□□□ -0.71
TRAF3-202ENST00000351691 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
TRAF3-202ENST00000351691 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
TRAF3-202ENST00000351691 FHL2Q14192 279 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 CSPG4Q6UVK1 2322 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
TRAF3-202ENST00000351691 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
TRAF3-202ENST00000351691 LECT2O14960 151 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
TRAF3-202ENST00000351691 Q96MF0 132 aa10.58□□□□□ -0.72
TRAF3-202ENST00000351691 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 NCR3O14931 201 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 LY6G6DO95868 133 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 DEFB131AP59861 70 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 C4orf3Q8WVX3 66 aa10.57□□□□□ -0.72
TRAF3-202ENST00000351691 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 GHRHP01286 108 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 SLURP1P55000 103 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 RPL36AP83881 106 aaKnown RBP10.56□□□□□ -0.72
TRAF3-202ENST00000351691 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 RPL36ALQ969Q0 106 aaKnown RBP10.56□□□□□ -0.72
TRAF3-202ENST00000351691 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 CCL18P55774 89 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 SS18Q15532 418 aa10.56□□□□□ -0.72
TRAF3-202ENST00000351691 FASNP49327 2511 aaKnown RBP10.55□□□□□ -0.72
TRAF3-202ENST00000351691 CCDC168Q8NDH2 2452 aa10.55□□□□□ -0.72
TRAF3-202ENST00000351691 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
TRAF3-202ENST00000351691 TMEM86BQ8N661 226 aa10.55□□□□□ -0.72
TRAF3-202ENST00000351691 PRM2P04554 102 aa10.54□□□□□ -0.72
TRAF3-202ENST00000351691 ITPR3Q14573 2671 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 INSP01308 110 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 LINC00158P58513 81 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 PDZD2O15018 2839 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
TRAF3-202ENST00000351691 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms