RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
CDK5RAP1-202ENST00000346416 ZFAND6Q6FIF0 208 aa9.85□□□□□ -0.83
CDK5RAP1-202ENST00000346416 CMYA5Q8N3K9 4069 aa9.85□□□□□ -0.83
CDK5RAP1-202ENST00000346416 A0A096LPF7 62 aa9.85□□□□□ -0.83
CDK5RAP1-202ENST00000346416 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
CDK5RAP1-202ENST00000346416 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
CDK5RAP1-202ENST00000346416 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
CDK5RAP1-202ENST00000346416 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
CDK5RAP1-202ENST00000346416 ANK2Q01484 3957 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 ATP5G1P05496 136 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 APOMO95445 188 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 LITAFQ99732 161 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 VPS25Q9BRG1 176 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 PGPEP1Q9NXJ5 209 aa9.83□□□□□ -0.84
CDK5RAP1-202ENST00000346416 IGKV3OR2-268A0A0C4DH90 116 aa9.82□□□□□ -0.84
CDK5RAP1-202ENST00000346416 F8W1H4 67 aa9.82□□□□□ -0.84
CDK5RAP1-202ENST00000346416 F5H768 121 aa9.82□□□□□ -0.84
CDK5RAP1-202ENST00000346416 MUSTN1Q8IVN3 82 aa9.82□□□□□ -0.84
CDK5RAP1-202ENST00000346416 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
CDK5RAP1-202ENST00000346416 NDUFA1O15239 70 aa9.81□□□□□ -0.84
CDK5RAP1-202ENST00000346416 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
CDK5RAP1-202ENST00000346416 CFC1P0CG37 223 aa9.81□□□□□ -0.84
CDK5RAP1-202ENST00000346416 A4D1N5 150 aa9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 HTN3P15516 51 aa9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 LYRM7Q5U5X0 104 aa9.8□□□□□ -0.84
CDK5RAP1-202ENST00000346416 H3BMG7 143 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 PRSS2P07478 247 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 NOTCH1P46531 2555 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 G3V4G9 280 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 Q9H8V8 135 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 RETNQ9HD89 108 aa9.79□□□□□ -0.84
CDK5RAP1-202ENST00000346416 TSPAN13O95857 204 aa9.78□□□□□ -0.84
CDK5RAP1-202ENST00000346416 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
CDK5RAP1-202ENST00000346416 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
CDK5RAP1-202ENST00000346416 TIMM17BO60830 172 aa9.77□□□□□ -0.85
CDK5RAP1-202ENST00000346416 MIAQ16674 131 aa9.77□□□□□ -0.85
CDK5RAP1-202ENST00000346416 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 PRO1854Q9UHT4 67 aa9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 TEX48A0A1B0GUV7 120 aa9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP1-202ENST00000346416 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
CDK5RAP1-202ENST00000346416 PCP4P48539 62 aa9.75□□□□□ -0.85
CDK5RAP1-202ENST00000346416 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
CDK5RAP1-202ENST00000346416 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
CDK5RAP1-202ENST00000346416 NPC2P61916 151 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 DAND5Q8N907 189 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 TENM3Q9P273 2699 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 A0A0B4J2C4 111 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 WFDC2Q14508 124 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 NBEAL1Q6ZS30 2694 aa9.74□□□□□ -0.85
CDK5RAP1-202ENST00000346416 A0A087WZ39 114 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 J3QR89 54 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 PRO0461Q9UI25 63 aa9.73□□□□□ -0.85
CDK5RAP1-202ENST00000346416 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
CDK5RAP1-202ENST00000346416 SS18Q15532 418 aa9.72□□□□□ -0.85
CDK5RAP1-202ENST00000346416 Q8N3U1 123 aa9.72□□□□□ -0.85
CDK5RAP1-202ENST00000346416 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
CDK5RAP1-202ENST00000346416 IGHV3-33P01772 117 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 IFITM1P13164 125 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 XCL1P47992 114 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 PSMB2P49721 201 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 HERV-K104P63124 156 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 SH2D6Q7Z4S9 175 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 LINC00269Q8N2A0 174 aa9.71□□□□□ -0.85
CDK5RAP1-202ENST00000346416 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.86
CDK5RAP1-202ENST00000346416 H7C2G1 150 aa9.7□□□□□ -0.86
CDK5RAP1-202ENST00000346416 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP1-202ENST00000346416 LELP1Q5T871 98 aa9.7□□□□□ -0.86
CDK5RAP1-202ENST00000346416 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP1-202ENST00000346416 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
CDK5RAP1-202ENST00000346416 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
CDK5RAP1-202ENST00000346416 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
CDK5RAP1-202ENST00000346416 LINC00308Q8TCZ7 52 aa9.69□□□□□ -0.86
CDK5RAP1-202ENST00000346416 Q6ZTC4 211 aa9.68□□□□□ -0.86
CDK5RAP1-202ENST00000346416 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
CDK5RAP1-202ENST00000346416 REG3AQ06141 175 aa9.67□□□□□ -0.86
CDK5RAP1-202ENST00000346416 A0A0J9YWU9 116 aa9.67□□□□□ -0.86
CDK5RAP1-202ENST00000346416 TCL1BO95988 128 aa9.67□□□□□ -0.86
CDK5RAP1-202ENST00000346416 Q1RN00 199 aa9.67□□□□□ -0.86
CDK5RAP1-202ENST00000346416 PRB2P02812 416 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP1-202ENST00000346416 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
CDK5RAP1-202ENST00000346416 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
CDK5RAP1-202ENST00000346416 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
CDK5RAP1-202ENST00000346416 H3BNG1 76 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms