RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TRACP01848 142 aa12.71□□□□□ -0.38
VHL-202ENST00000345392 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.38
VHL-202ENST00000345392 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.38
VHL-202ENST00000345392 A0A096LNT2 108 aa12.7□□□□□ -0.38
VHL-202ENST00000345392 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
VHL-202ENST00000345392 APCP25054 2843 aa12.7□□□□□ -0.38
VHL-202ENST00000345392 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
VHL-202ENST00000345392 JMJD1CQ15652 2540 aa12.69□□□□□ -0.38
VHL-202ENST00000345392 TRGV1A0A0A0MS02 117 aa12.69□□□□□ -0.38
VHL-202ENST00000345392 Q96MF0 132 aa12.69□□□□□ -0.38
VHL-202ENST00000345392 F5H768 121 aa12.68□□□□□ -0.38
VHL-202ENST00000345392 C9orf153Q5TBE3 101 aa12.68□□□□□ -0.38
VHL-202ENST00000345392 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
VHL-202ENST00000345392 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
VHL-202ENST00000345392 INSP01308 110 aa12.68□□□□□ -0.38
VHL-202ENST00000345392 C3orf22Q8N5N4 141 aa12.66□□□□□ -0.38
VHL-202ENST00000345392 C11orf44Q8N8P7 122 aa12.66□□□□□ -0.38
VHL-202ENST00000345392 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
VHL-202ENST00000345392 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
VHL-202ENST00000345392 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
VHL-202ENST00000345392 PPDPFQ9H3Y8 114 aa12.65□□□□□ -0.38
VHL-202ENST00000345392 PEMTQ9UBM1 199 aa12.65□□□□□ -0.38
VHL-202ENST00000345392 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.38
VHL-202ENST00000345392 Q6YL49 198 aa12.65□□□□□ -0.38
VHL-202ENST00000345392 LINC00337Q8N6G1 96 aa12.65□□□□□ -0.38
VHL-202ENST00000345392 MALP21145 153 aa12.65□□□□□ -0.39
VHL-202ENST00000345392 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.39
VHL-202ENST00000345392 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.39
VHL-202ENST00000345392 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.39
VHL-202ENST00000345392 CR1P17927 2039 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 Q6ZTI0 123 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 KLK5Q9Y337 293 aaPredicted RBP12.64□□□□□ -0.39
VHL-202ENST00000345392 UNC79Q9P2D8 2635 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 MIR7-3HGQ8N6C7 128 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 TOMM7Q9P0U1 55 aa12.64□□□□□ -0.39
VHL-202ENST00000345392 IGHV4-31P0DP07 118 aa12.63□□□□□ -0.39
VHL-202ENST00000345392 DSCR9P59020 149 aa12.63□□□□□ -0.39
VHL-202ENST00000345392 IGKV2-28A0A075B6P5 120 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 A0A087WYN8 130 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 K7EQD1 137 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 IGKV2D-28P01615 120 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 CRPP02741 224 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 C1orf158Q8N1D5 194 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
VHL-202ENST00000345392 UQCRQO14949 82 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 INAFM2P0DMQ5 153 aa12.62□□□□□ -0.39
VHL-202ENST00000345392 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
VHL-202ENST00000345392 FAM222AQ5U5X8 452 aa12.61□□□□□ -0.39
VHL-202ENST00000345392 TRAV13-2A0A0B4J235 113 aa12.61□□□□□ -0.39
VHL-202ENST00000345392 SND1-IT1Q9HBX3 110 aa12.61□□□□□ -0.39
VHL-202ENST00000345392 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
VHL-202ENST00000345392 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
VHL-202ENST00000345392 A0A1W2PRX2 142 aa12.6□□□□□ -0.39
VHL-202ENST00000345392 ATP5G1P05496 136 aa12.6□□□□□ -0.39
VHL-202ENST00000345392 UBE2L6O14933 153 aa12.59□□□□□ -0.39
VHL-202ENST00000345392 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
VHL-202ENST00000345392 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
VHL-202ENST00000345392 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
VHL-202ENST00000345392 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
VHL-202ENST00000345392 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 J3QLI3 93 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 DNAL4O96015 105 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 CXCL5P42830 114 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 LINC00158P58513 81 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 STHQ8IWL8 128 aa12.58□□□□□ -0.4
VHL-202ENST00000345392 LOC100131303A0A0U1RQF7 123 aa12.57□□□□□ -0.4
VHL-202ENST00000345392 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
VHL-202ENST00000345392 FSHBP01225 129 aa12.57□□□□□ -0.4
VHL-202ENST00000345392 IGKV3D-7A0A0C4DH55 119 aa12.56□□□□□ -0.4
VHL-202ENST00000345392 TRBV10-1A0A0K0K1A3 114 aa12.56□□□□□ -0.4
VHL-202ENST00000345392 PF4P02776 101 aa12.56□□□□□ -0.4
VHL-202ENST00000345392 NOP10Q9NPE3 64 aaKnown RBP12.56□□□□□ -0.4
VHL-202ENST00000345392 CFAP161Q6P656 301 aa12.56□□□□□ -0.4
VHL-202ENST00000345392 TMEM243Q9BU79 118 aa12.56□□□□□ -0.4
VHL-202ENST00000345392 COX7CP15954 63 aa12.55□□□□□ -0.4
VHL-202ENST00000345392 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
VHL-202ENST00000345392 C2orf48Q96LS8 159 aa12.55□□□□□ -0.4
VHL-202ENST00000345392 FLNAP21333 2647 aaKnown RBP12.55□□□□□ -0.4
VHL-202ENST00000345392 PFN2P35080 140 aa12.55□□□□□ -0.4
VHL-202ENST00000345392 SLPIP03973 132 aa12.54□□□□□ -0.4
VHL-202ENST00000345392 CCL18P55774 89 aa12.54□□□□□ -0.4
VHL-202ENST00000345392 MTORP42345 2549 aa12.54□□□□□ -0.4
VHL-202ENST00000345392 ACANP16112 2415 aa12.54□□□□□ -0.4
VHL-202ENST00000345392 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
VHL-202ENST00000345392 LECT2O14960 151 aa12.53□□□□□ -0.4
VHL-202ENST00000345392 LINC00846Q9NV44 126 aa12.53□□□□□ -0.4
VHL-202ENST00000345392 NCR3O14931 201 aa12.53□□□□□ -0.4
VHL-202ENST00000345392 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
VHL-202ENST00000345392 CYSTM1Q9H1C7 97 aa12.52□□□□□ -0.41
VHL-202ENST00000345392 IGLV4-60A0A075B6I1 120 aa12.52□□□□□ -0.41
VHL-202ENST00000345392 A0A087WVE0 104 aa12.52□□□□□ -0.41
VHL-202ENST00000345392 hADV29S1A0JD25 119 aa12.52□□□□□ -0.41
VHL-202ENST00000345392 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
VHL-202ENST00000345392 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
VHL-202ENST00000345392 PDZD2O15018 2839 aa12.51□□□□□ -0.41
VHL-202ENST00000345392 LRRC75A-AS1Q8N1F1 130 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms