RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
CCDC78-202ENST00000345165 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
CCDC78-202ENST00000345165 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
CCDC78-202ENST00000345165 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
CCDC78-202ENST00000345165 COX6A2Q02221 97 aa12.05□□□□□ -0.48
CCDC78-202ENST00000345165 SYCNQ0VAF6 134 aa12.05□□□□□ -0.48
CCDC78-202ENST00000345165 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
CCDC78-202ENST00000345165 PLAC8Q9NZF1 115 aa12.05□□□□□ -0.48
CCDC78-202ENST00000345165 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
CCDC78-202ENST00000345165 PAPPA-AS1Q5QFB9 102 aa12.03□□□□□ -0.48
CCDC78-202ENST00000345165 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
CCDC78-202ENST00000345165 OPRPNQ99935 248 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-202ENST00000345165 IGLV4-69A0A075B6H9 119 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 A0A087WYN8 130 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 Q6ZN92 141 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 AMELXQ99217 191 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 RPS10P5Q9NQ39 176 aa12.02□□□□□ -0.49
CCDC78-202ENST00000345165 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
CCDC78-202ENST00000345165 DMBT1Q9UGM3 2413 aaPredicted RBP12.01□□□□□ -0.49
CCDC78-202ENST00000345165 TGIF2-C20orf24A0A0A6YYL0 155 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 FAM19A3Q7Z5A8 133 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 C5orf38Q86SI9 138 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 SVBPQ8N300 66 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 TIMM17AQ99595 171 aa12.01□□□□□ -0.49
CCDC78-202ENST00000345165 ALKBH7Q9BT30 221 aaPredicted RBP12.01□□□□□ -0.49
CCDC78-202ENST00000345165 A0A087WZ39 114 aa12□□□□□ -0.49
CCDC78-202ENST00000345165 CHTF8P0CG12 524 aa12□□□□□ -0.49
CCDC78-202ENST00000345165 LINC00242Q5T6M2 205 aa12□□□□□ -0.49
CCDC78-202ENST00000345165 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 SNAPINO95295 136 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 UBE2D1P51668 147 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
CCDC78-202ENST00000345165 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 TOMM6Q96B49 74 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
CCDC78-202ENST00000345165 A0A096LNI7 61 aa11.98□□□□□ -0.49
CCDC78-202ENST00000345165 LOC107984640A0A0U1RRK4 108 aa11.98□□□□□ -0.49
CCDC78-202ENST00000345165 LINC00173Q6ZV60 143 aa11.98□□□□□ -0.49
CCDC78-202ENST00000345165 LINC00526Q96FQ7 95 aa11.98□□□□□ -0.49
CCDC78-202ENST00000345165 VCX2Q9H322 139 aa11.98□□□□□ -0.49
CCDC78-202ENST00000345165 SEC11AP67812 179 aa11.97□□□□□ -0.49
CCDC78-202ENST00000345165 Q6ZRU5 148 aa11.97□□□□□ -0.49
CCDC78-202ENST00000345165 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
CCDC78-202ENST00000345165 MRPL18Q9H0U6 180 aaKnown RBP11.97□□□□□ -0.49
CCDC78-202ENST00000345165 MRPL35Q9NZE8 188 aaKnown RBP11.97□□□□□ -0.49
CCDC78-202ENST00000345165 APOC3P02656 99 aa11.96□□□□□ -0.49
CCDC78-202ENST00000345165 MAJINQ3KP22 176 aa11.96□□□□□ -0.49
CCDC78-202ENST00000345165 ERASQ7Z444 233 aa11.96□□□□□ -0.49
CCDC78-202ENST00000345165 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
CCDC78-202ENST00000345165 IGKV2-24A0A0C4DH68 120 aa11.95□□□□□ -0.5
CCDC78-202ENST00000345165 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
CCDC78-202ENST00000345165 KRTAP29-1A8MX34 341 aaPredicted RBP11.94□□□□□ -0.5
CCDC78-202ENST00000345165 STPG4Q8N801 248 aa11.94□□□□□ -0.5
CCDC78-202ENST00000345165 C7orf33Q8WU49 177 aa11.94□□□□□ -0.5
CCDC78-202ENST00000345165 NDUFA1O15239 70 aa11.93□□□□□ -0.5
CCDC78-202ENST00000345165 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
CCDC78-202ENST00000345165 TLX1NBP0CAT3 122 aa11.92□□□□□ -0.5
CCDC78-202ENST00000345165 HERVK_113P63121 156 aa11.92□□□□□ -0.5
CCDC78-202ENST00000345165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-202ENST00000345165 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
CCDC78-202ENST00000345165 OXTP01178 125 aa11.9□□□□□ -0.5
CCDC78-202ENST00000345165 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
CCDC78-202ENST00000345165 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
CCDC78-202ENST00000345165 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
CCDC78-202ENST00000345165 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
CCDC78-202ENST00000345165 TRAPPC1Q9Y5R8 145 aa11.89□□□□□ -0.51
CCDC78-202ENST00000345165 Q8IZM0 81 aa11.87□□□□□ -0.51
CCDC78-202ENST00000345165 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
CCDC78-202ENST00000345165 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
CCDC78-202ENST00000345165 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
CCDC78-202ENST00000345165 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
CCDC78-202ENST00000345165 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
CCDC78-202ENST00000345165 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
CCDC78-202ENST00000345165 GAGE2BQ13066 116 aa11.85□□□□□ -0.51
CCDC78-202ENST00000345165 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
CCDC78-202ENST00000345165 LINC00614P0C842 121 aa11.84□□□□□ -0.51
CCDC78-202ENST00000345165 RAB5BP61020 215 aa11.84□□□□□ -0.51
CCDC78-202ENST00000345165 RPL18AQ02543 176 aaKnown RBP11.84□□□□□ -0.51
CCDC78-202ENST00000345165 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
CCDC78-202ENST00000345165 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
CCDC78-202ENST00000345165 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
CCDC78-202ENST00000345165 J3QL48 77 aa11.83□□□□□ -0.52
CCDC78-202ENST00000345165 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
CCDC78-202ENST00000345165 PMVKQ15126 192 aa11.83□□□□□ -0.52
CCDC78-202ENST00000345165 CST9LQ9H4G1 147 aa11.83□□□□□ -0.52
CCDC78-202ENST00000345165 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
CCDC78-202ENST00000345165 PRSS2P07478 247 aa11.82□□□□□ -0.52
CCDC78-202ENST00000345165 CXCL5P42830 114 aa11.82□□□□□ -0.52
CCDC78-202ENST00000345165 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
CCDC78-202ENST00000345165 PACRGQ96M98 296 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-202ENST00000345165 A0A096LNJ9 63 aa11.81□□□□□ -0.52
CCDC78-202ENST00000345165 NDUFC2-KCTD14E9PQ53 114 aa11.81□□□□□ -0.52
CCDC78-202ENST00000345165 ODF1Q14990 250 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms