RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
USF2-202ENST00000343550 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
USF2-202ENST00000343550 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
USF2-202ENST00000343550 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
USF2-202ENST00000343550 G0S2P27469 103 aa11.59□□□□□ -0.55
USF2-202ENST00000343550 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
USF2-202ENST00000343550 TMEM141Q96I45 108 aa11.59□□□□□ -0.55
USF2-202ENST00000343550 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
USF2-202ENST00000343550 KRTAP29-1A8MX34 341 aaPredicted RBP11.58□□□□□ -0.56
USF2-202ENST00000343550 COX7A2LO14548 114 aa11.58□□□□□ -0.56
USF2-202ENST00000343550 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
USF2-202ENST00000343550 C5orf38Q86SI9 138 aa11.57□□□□□ -0.56
USF2-202ENST00000343550 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
USF2-202ENST00000343550 TOMM6Q96B49 74 aa11.57□□□□□ -0.56
USF2-202ENST00000343550 NPSP0C0P6 89 aa11.56□□□□□ -0.56
USF2-202ENST00000343550 MALP21145 153 aa11.56□□□□□ -0.56
USF2-202ENST00000343550 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 AMELXQ99217 191 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 SMCO4Q9NRQ5 59 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 ZC2HC1BQ5TFG8 222 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 CBLN2Q8IUK8 224 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 VCX2Q9H322 139 aa11.55□□□□□ -0.56
USF2-202ENST00000343550 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 LINC00242Q5T6M2 205 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 Q6ZN92 141 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 C18orf32Q8TCD1 76 aa11.54□□□□□ -0.56
USF2-202ENST00000343550 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
USF2-202ENST00000343550 COX6A2Q02221 97 aa11.53□□□□□ -0.56
USF2-202ENST00000343550 ERASQ7Z444 233 aa11.53□□□□□ -0.56
USF2-202ENST00000343550 TIMM17AQ99595 171 aa11.53□□□□□ -0.56
USF2-202ENST00000343550 UBE2D1P51668 147 aa11.52□□□□□ -0.57
USF2-202ENST00000343550 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 PANO1I0J062 215 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 APOMO95445 188 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 SCGB3A1Q96QR1 104 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
USF2-202ENST00000343550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
USF2-202ENST00000343550 IGLV4-69A0A075B6H9 119 aa11.5□□□□□ -0.57
USF2-202ENST00000343550 LINC00614P0C842 121 aa11.5□□□□□ -0.57
USF2-202ENST00000343550 A0A087WZ39 114 aa11.49□□□□□ -0.57
USF2-202ENST00000343550 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
USF2-202ENST00000343550 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
USF2-202ENST00000343550 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
USF2-202ENST00000343550 SCO1O75880 301 aa11.48□□□□□ -0.57
USF2-202ENST00000343550 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
USF2-202ENST00000343550 CARD19Q96LW7 228 aa11.48□□□□□ -0.57
USF2-202ENST00000343550 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
USF2-202ENST00000343550 A0A096LNJ9 63 aa11.46□□□□□ -0.57
USF2-202ENST00000343550 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
USF2-202ENST00000343550 OXTP01178 125 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 RAB5BP61020 215 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 Q6ZRU5 148 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 LINC01561Q8N1V8 128 aa11.45□□□□□ -0.58
USF2-202ENST00000343550 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
USF2-202ENST00000343550 SEC11AP67812 179 aa11.44□□□□□ -0.58
USF2-202ENST00000343550 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
USF2-202ENST00000343550 CST9LQ9H4G1 147 aa11.44□□□□□ -0.58
USF2-202ENST00000343550 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 COLCA2A8K830 154 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
USF2-202ENST00000343550 TRGC2P03986 189 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
USF2-202ENST00000343550 HERVK_113P63121 156 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 SERTAD4-AS1Q5TG53 156 aa11.43□□□□□ -0.58
USF2-202ENST00000343550 F8WDY8 70 aa11.42□□□□□ -0.58
USF2-202ENST00000343550 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
USF2-202ENST00000343550 A0A087WYN8 130 aa11.41□□□□□ -0.58
USF2-202ENST00000343550 A0A096LNI7 61 aa11.41□□□□□ -0.58
USF2-202ENST00000343550 HBDP02042 147 aa11.41□□□□□ -0.58
USF2-202ENST00000343550 PMVKQ15126 192 aa11.41□□□□□ -0.58
USF2-202ENST00000343550 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
USF2-202ENST00000343550 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
USF2-202ENST00000343550 IGKV2-24A0A0C4DH68 120 aa11.4□□□□□ -0.58
USF2-202ENST00000343550 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
USF2-202ENST00000343550 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
USF2-202ENST00000343550 TINCRA0A1B0GVN0 87 aa11.4□□□□□ -0.59
USF2-202ENST00000343550 MAJINQ3KP22 176 aa11.4□□□□□ -0.59
USF2-202ENST00000343550 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.59
USF2-202ENST00000343550 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.59
USF2-202ENST00000343550 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.59
USF2-202ENST00000343550 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
USF2-202ENST00000343550 C10orf25Q5T742 122 aa11.39□□□□□ -0.59
USF2-202ENST00000343550 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
USF2-202ENST00000343550 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
USF2-202ENST00000343550 NDUFA1O15239 70 aa11.38□□□□□ -0.59
USF2-202ENST00000343550 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
USF2-202ENST00000343550 KRTAP3-2Q9BYR7 98 aa11.38□□□□□ -0.59
USF2-202ENST00000343550 LINC00474Q9P2X8 69 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms