RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 SMCR5Q8TEV8 140 aa14.95□□□□□ -0.02
E2F1-201ENST00000343380 CHCHD5Q9BSY4 110 aa14.95□□□□□ -0.02
E2F1-201ENST00000343380 CSDC2Q9Y534 153 aaKnown RBP14.95□□□□□ -0.02
E2F1-201ENST00000343380 DAZ2Q13117 558 aaKnown RBP14.93□□□□□ -0.02
E2F1-201ENST00000343380 DAZ4Q86SG3 579 aaKnown RBP14.93□□□□□ -0.02
E2F1-201ENST00000343380 DAZ3Q9NR90 486 aaKnown RBP14.93□□□□□ -0.02
E2F1-201ENST00000343380 KMT2BQ9UMN6 2715 aaPredicted RBP14.92□□□□□ -0.02
E2F1-201ENST00000343380 A0A1W2PRX2 142 aa14.92□□□□□ -0.02
E2F1-201ENST00000343380 LOC100131303A0A0U1RQF7 123 aa14.92□□□□□ -0.02
E2F1-201ENST00000343380 NOP10Q9NPE3 64 aaKnown RBP14.92□□□□□ -0.02
E2F1-201ENST00000343380 TRBV7-7A0A0K0K1E9 115 aa14.91□□□□□ -0.02
E2F1-201ENST00000343380 TRBV10-1A0A0K0K1A3 114 aa14.91□□□□□ -0.02
E2F1-201ENST00000343380 BAALC-AS2P0C853 105 aa14.9□□□□□ -0.02
E2F1-201ENST00000343380 SVIPQ8NHG7 77 aa14.89□□□□□ -0.03
E2F1-201ENST00000343380 Q9HAA7 133 aa14.89□□□□□ -0.03
E2F1-201ENST00000343380 PLA2G2AP14555 144 aa14.88□□□□□ -0.03
E2F1-201ENST00000343380 IGKV3OR2-268A0A0C4DH90 116 aa14.87□□□□□ -0.03
E2F1-201ENST00000343380 TRACP01848 142 aa14.87□□□□□ -0.03
E2F1-201ENST00000343380 GIG44P09565 113 aaPredicted RBP14.87□□□□□ -0.03
E2F1-201ENST00000343380 HERV-K104P63124 156 aa14.87□□□□□ -0.03
E2F1-201ENST00000343380 LINC00337Q8N6G1 96 aa14.87□□□□□ -0.03
E2F1-201ENST00000343380 COPS9Q8WXC6 57 aa14.87□□□□□ -0.03
E2F1-201ENST00000343380 CCDC168Q8NDH2 2452 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 WFDC10AQ9H1F0 79 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 IGKV2-28A0A075B6P5 120 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 IGKV2D-28P01615 120 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 MIR7-3HGQ8N6C7 128 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 C3orf56Q8N813 242 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 TMEM243Q9BU79 118 aa14.86□□□□□ -0.03
E2F1-201ENST00000343380 UBE2L6O14933 153 aa14.85□□□□□ -0.03
E2F1-201ENST00000343380 TOMM7Q9P0U1 55 aa14.85□□□□□ -0.03
E2F1-201ENST00000343380 FAM236AA0A1B0GUQ0 79 aa14.84□□□□□ -0.03
E2F1-201ENST00000343380 FAM236BA0A1B0GV22 79 aa14.84□□□□□ -0.03
E2F1-201ENST00000343380 PLAC8L1A1L4L8 177 aa14.84□□□□□ -0.03
E2F1-201ENST00000343380 HIST2H2BCQ6DN03 193 aa14.84□□□□□ -0.03
E2F1-201ENST00000343380 ITPR3Q14573 2671 aa14.84□□□□□ -0.03
E2F1-201ENST00000343380 ACYP1P07311 99 aa14.83□□□□□ -0.04
E2F1-201ENST00000343380 APCP25054 2843 aa14.83□□□□□ -0.04
E2F1-201ENST00000343380 COX7B2Q8TF08 81 aa14.82□□□□□ -0.04
E2F1-201ENST00000343380 IGLV4-60A0A075B6I1 120 aa14.82□□□□□ -0.04
E2F1-201ENST00000343380 UBR5O95071 2799 aaPredicted RBP14.81□□□□□ -0.04
E2F1-201ENST00000343380 TRGV2A0A075B6R0 118 aa14.81□□□□□ -0.04
E2F1-201ENST00000343380 TRAV25A0A0B4J276 109 aa14.81□□□□□ -0.04
E2F1-201ENST00000343380 CCL24O00175 119 aa14.81□□□□□ -0.04
E2F1-201ENST00000343380 RPL28P46779 137 aaKnown RBP14.81□□□□□ -0.04
E2F1-201ENST00000343380 C9orf129Q5T035 196 aaKnown RBP14.81□□□□□ -0.04
E2F1-201ENST00000343380 SND1-IT1Q9HBX3 110 aa14.81□□□□□ -0.04
E2F1-201ENST00000343380 CRPP02741 224 aa14.8□□□□□ -0.04
E2F1-201ENST00000343380 SDIM1Q6ZPB5 146 aa14.8□□□□□ -0.04
E2F1-201ENST00000343380 A0A087WYN8 130 aa14.79□□□□□ -0.04
E2F1-201ENST00000343380 TRAV13-2A0A0B4J235 113 aa14.79□□□□□ -0.04
E2F1-201ENST00000343380 LINC00643Q86TS7 51 aa14.79□□□□□ -0.04
E2F1-201ENST00000343380 RPL35AP18077 110 aaKnown RBP14.78□□□□□ -0.04
E2F1-201ENST00000343380 SMIM11BQ8TCY0 68 aa14.78□□□□□ -0.04
E2F1-201ENST00000343380 MALP21145 153 aa14.77□□□□□ -0.05
E2F1-201ENST00000343380 LINC00158P58513 81 aa14.77□□□□□ -0.05
E2F1-201ENST00000343380 GAGE2AQ6NT46 116 aa14.77□□□□□ -0.05
E2F1-201ENST00000343380 CCL18P55774 89 aa14.76□□□□□ -0.05
E2F1-201ENST00000343380 FAM222AQ5U5X8 452 aa14.76□□□□□ -0.05
E2F1-201ENST00000343380 DEFB113Q30KQ7 82 aa14.76□□□□□ -0.05
E2F1-201ENST00000343380 SMIM20Q8N5G0 67 aa14.76□□□□□ -0.05
E2F1-201ENST00000343380 IMUPQ9GZP8 106 aa14.76□□□□□ -0.05
E2F1-201ENST00000343380 IGHV3OR16-9A0A0B4J2B5 98 aa14.75□□□□□ -0.05
E2F1-201ENST00000343380 PPDPFQ9H3Y8 114 aa14.75□□□□□ -0.05
E2F1-201ENST00000343380 FN1P02751 2386 aaKnown RBP14.75□□□□□ -0.05
E2F1-201ENST00000343380 FLNAP21333 2647 aaKnown RBP14.75□□□□□ -0.05
E2F1-201ENST00000343380 DNAJC9-AS1A6NH13 148 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 PF4P02776 101 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 C5orf38Q86SI9 138 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 ATP5G1P05496 136 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 PFN2P35080 140 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 ESM1Q9NQ30 184 aa14.74□□□□□ -0.05
E2F1-201ENST00000343380 TRGV4A0A0C4DH28 118 aa14.73□□□□□ -0.05
E2F1-201ENST00000343380 TRBV6-4A0A1B0GX49 114 aa14.73□□□□□ -0.05
E2F1-201ENST00000343380 KRTAP1-3Q8IUG1 177 aa14.72□□□□□ -0.05
E2F1-201ENST00000343380 C16orf74Q96GX8 76 aa14.72□□□□□ -0.05
E2F1-201ENST00000343380 MTORP42345 2549 aa14.72□□□□□ -0.05
E2F1-201ENST00000343380 TRBV6-8A0A0A6YYG3 113 aa14.71□□□□□ -0.05
E2F1-201ENST00000343380 J3QKU1 62 aa14.71□□□□□ -0.05
E2F1-201ENST00000343380 INAFM2P0DMQ5 153 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 FHL2Q14192 279 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 CSNK1G2-AS1Q8NCQ2 148 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 C11orf68Q9H3H3 251 aaKnown RBP14.7□□□□□ -0.06
E2F1-201ENST00000343380 C14orf132Q9NPU4 83 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 C19orf73Q9NVV2 129 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 NBEAL2Q6ZNJ1 2754 aa14.7□□□□□ -0.06
E2F1-201ENST00000343380 ACANP16112 2415 aa14.69□□□□□ -0.06
E2F1-201ENST00000343380 A0A087WZ39 114 aa14.68□□□□□ -0.06
E2F1-201ENST00000343380 OVOL2Q9BRP0 275 aa14.68□□□□□ -0.06
E2F1-201ENST00000343380 DNAL4O96015 105 aa14.67□□□□□ -0.06
E2F1-201ENST00000343380 GCN1Q92616 2671 aaKnown RBP14.67□□□□□ -0.06
E2F1-201ENST00000343380 SLPIP03973 132 aa14.67□□□□□ -0.06
E2F1-201ENST00000343380 LECT2O14960 151 aa14.66□□□□□ -0.06
E2F1-201ENST00000343380 IBA57-AS1B1ANH7 110 aa14.66□□□□□ -0.06
E2F1-201ENST00000343380 PAX4O43316 350 aa14.66□□□□□ -0.06
E2F1-201ENST00000343380 TMEM86BQ8N661 226 aa14.66□□□□□ -0.06
E2F1-201ENST00000343380 LRRC75A-AS1Q8N1F1 130 aa14.65□□□□□ -0.06
E2F1-201ENST00000343380 OR13C6PQ8NH95 151 aa14.64□□□□□ -0.07
E2F1-201ENST00000343380 LINC00959A0A1B0GUT2 108 aa14.64□□□□□ -0.07
E2F1-201ENST00000343380 NCR3O14931 201 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms