RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 PLNP26678 52 aa5.91□□□□□ -1.46
NLRC4-201ENST00000342905 UBE2D1P51668 147 aa5.91□□□□□ -1.46
NLRC4-201ENST00000342905 PKIAP61925 76 aa5.91□□□□□ -1.46
NLRC4-201ENST00000342905 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
NLRC4-201ENST00000342905 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
NLRC4-201ENST00000342905 TRAV9-2A0A087WT02 112 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 IGHV3-30P01768 117 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 IGHV3-33P01772 117 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 IGHV3-30-3P0DP02 117 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 IGHV3-30-5P0DP03 117 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 S100A12P80511 92 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 NFE4Q86UQ8 179 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 CHAC1Q9BUX1 264 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 MRPS16Q9Y3D3 137 aaKnown RBP5.9□□□□□ -1.47
NLRC4-201ENST00000342905 PAM16Q9Y3D7 125 aa5.9□□□□□ -1.47
NLRC4-201ENST00000342905 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 TRAV13-1A0A0B4J241 112 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 IGKV3OR2-268A0A0C4DH90 116 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 ANGP03950 147 aaKnown RBP5.89□□□□□ -1.47
NLRC4-201ENST00000342905 SPATA45Q537H7 98 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 FAM19A3Q7Z5A8 133 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 FRAS1Q86XX4 4008 aa5.89□□□□□ -1.47
NLRC4-201ENST00000342905 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
NLRC4-201ENST00000342905 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
NLRC4-201ENST00000342905 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
NLRC4-201ENST00000342905 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
NLRC4-201ENST00000342905 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
NLRC4-201ENST00000342905 LINC00269Q8N2A0 174 aa5.88□□□□□ -1.47
NLRC4-201ENST00000342905 STPG4Q8N801 248 aa5.88□□□□□ -1.47
NLRC4-201ENST00000342905 LINC00959A0A1B0GUT2 108 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 HSBP1L1C9JCN9 74 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 COX6A2Q02221 97 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 LINC01556Q5JQF7 62 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 Q6ZR54 194 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 UPK3BQ9BT76 320 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 PRO1933Q9H354 126 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 KLK12Q9UKR0 248 aa5.87□□□□□ -1.47
NLRC4-201ENST00000342905 DNAH2Q9P225 4427 aa5.86□□□□□ -1.47
NLRC4-201ENST00000342905 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
NLRC4-201ENST00000342905 DNAH10OSP0CZ25 163 aa5.86□□□□□ -1.47
NLRC4-201ENST00000342905 REG3AQ06141 175 aa5.86□□□□□ -1.47
NLRC4-201ENST00000342905 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
NLRC4-201ENST00000342905 HECTD4Q9Y4D8 3996 aa5.86□□□□□ -1.47
NLRC4-201ENST00000342905 IGKV2D-26A0A0A0MRZ7 120 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 M0R2N4 97 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 SIVA1O15304 175 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 CCL25O15444 150 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 HERVK_113P63121 156 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 SEC11AP67812 179 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 SS18Q15532 418 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 TTC32Q5I0X7 151 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 ENHOQ6UWT2 76 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 LINC00336Q6ZUF6 198 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 LINC00469Q8N7U9 141 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 PRR34Q9NV39 138 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
NLRC4-201ENST00000342905 IGLV10-54A0A075B6I4 117 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 CRPP02741 224 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 HERVK_113P61574 105 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 Q9H8V8 135 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 FAT2Q9NYQ8 4349 aa5.84□□□□□ -1.47
NLRC4-201ENST00000342905 IGHV3-64A0A075B6Q5 118 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 TRAV8-3A0A0A6YYJ7 113 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 E9PLD3 99 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 XCL1P47992 114 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 NMUP48645 174 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 C1orf134Q5TEV5 83 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 CHCHD10Q8WYQ3 142 aaPredicted RBP5.83□□□□□ -1.48
NLRC4-201ENST00000342905 UBE2WQ96B02 151 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 C14orf144Q96I85 54 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 TP73-AS1Q9UF72 201 aa5.83□□□□□ -1.48
NLRC4-201ENST00000342905 IGHV3OR16-9A0A0B4J2B5 98 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 SMIM1B2RUZ4 78 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 TSTD3H0UI37 97 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 H3BRM9 83 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 LEPROTO15243 131 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 COX8AP10176 69 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 PCP2Q8IVA1 136 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 TTTY13Q9BZ97 58 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
NLRC4-201ENST00000342905 DNAH17Q9UFH2 4485 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 RTL8CO15255 209 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 FOXI1Q12951 378 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 MIAQ16674 131 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
NLRC4-201ENST00000342905 A0A087WZ39 114 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 TRAV8-4A0A0B4J246 113 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 IGLV5-39A0A0G2JS06 123 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 GAGE12HA6NDE8 117 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 IBA57-AS1B1ANH7 110 aa5.8□□□□□ -1.48
NLRC4-201ENST00000342905 K7EP13 123 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms