RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 UBE2D1P51668 147 aa11.31□□□□□ -0.6
CARMIL3-201ENST00000342740 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
CARMIL3-201ENST00000342740 XAGE1AQ9HD64 81 aa11.31□□□□□ -0.6
CARMIL3-201ENST00000342740 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 TRAV10A0A0B4J240 114 aa11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 LELP1Q5T871 98 aa11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 TMEM256-PLSCR3K7ERE1 68 aa11.3□□□□□ -0.6
CARMIL3-201ENST00000342740 H3BQ85 93 aa11.29□□□□□ -0.6
CARMIL3-201ENST00000342740 COX7BP24311 80 aa11.29□□□□□ -0.6
CARMIL3-201ENST00000342740 CLUHP3Q96NS8 147 aa11.29□□□□□ -0.6
CARMIL3-201ENST00000342740 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
CARMIL3-201ENST00000342740 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-201ENST00000342740 A0A096LNJ9 63 aa11.28□□□□□ -0.6
CARMIL3-201ENST00000342740 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
CARMIL3-201ENST00000342740 UBE2AP49459 152 aa11.28□□□□□ -0.6
CARMIL3-201ENST00000342740 TRIAP1O43715 76 aa11.28□□□□□ -0.6
CARMIL3-201ENST00000342740 LINC00526Q96FQ7 95 aa11.28□□□□□ -0.6
CARMIL3-201ENST00000342740 TIMM17BO60830 172 aa11.27□□□□□ -0.61
CARMIL3-201ENST00000342740 G3V4G9 280 aa11.27□□□□□ -0.61
CARMIL3-201ENST00000342740 CENPEQ02224 2701 aa11.27□□□□□ -0.61
CARMIL3-201ENST00000342740 LINC00242Q5T6M2 205 aa11.26□□□□□ -0.61
CARMIL3-201ENST00000342740 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
CARMIL3-201ENST00000342740 SYCNQ0VAF6 134 aa11.25□□□□□ -0.61
CARMIL3-201ENST00000342740 NREPQ16612 68 aa11.25□□□□□ -0.61
CARMIL3-201ENST00000342740 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CARMIL3-201ENST00000342740 Q8N2B8 174 aa11.25□□□□□ -0.61
CARMIL3-201ENST00000342740 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
CARMIL3-201ENST00000342740 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
CARMIL3-201ENST00000342740 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
CARMIL3-201ENST00000342740 BEAN1Q3B7T3 259 aa11.24□□□□□ -0.61
CARMIL3-201ENST00000342740 PRUNE2Q8WUY3 3088 aa11.24□□□□□ -0.61
CARMIL3-201ENST00000342740 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
CARMIL3-201ENST00000342740 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-201ENST00000342740 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
CARMIL3-201ENST00000342740 TEX49A0A1B0GTD5 131 aa11.22□□□□□ -0.61
CARMIL3-201ENST00000342740 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 C6orf99Q4VX62 202 aa11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 Q6ZSN1 163 aa11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 FHL2Q14192 279 aa11.21□□□□□ -0.61
CARMIL3-201ENST00000342740 HIGD2AQ9BW72 106 aa11.21□□□□□ -0.62
CARMIL3-201ENST00000342740 RETNQ9HD89 108 aa11.21□□□□□ -0.62
CARMIL3-201ENST00000342740 SLPIP03973 132 aa11.2□□□□□ -0.62
CARMIL3-201ENST00000342740 RNF183Q96D59 192 aa11.2□□□□□ -0.62
CARMIL3-201ENST00000342740 PDE6GP18545 87 aa11.19□□□□□ -0.62
CARMIL3-201ENST00000342740 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
CARMIL3-201ENST00000342740 KIF25-AS1Q9Y6Z4 181 aa11.19□□□□□ -0.62
CARMIL3-201ENST00000342740 FAM236AA0A1B0GUQ0 79 aa11.18□□□□□ -0.62
CARMIL3-201ENST00000342740 FAM236BA0A1B0GV22 79 aa11.18□□□□□ -0.62
CARMIL3-201ENST00000342740 IGLV4-60A0A075B6I1 120 aa11.18□□□□□ -0.62
CARMIL3-201ENST00000342740 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
CARMIL3-201ENST00000342740 Q8IZM0 81 aa11.17□□□□□ -0.62
CARMIL3-201ENST00000342740 AMELXQ99217 191 aa11.16□□□□□ -0.62
CARMIL3-201ENST00000342740 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-201ENST00000342740 A0A1B0GX51 115 aa11.15□□□□□ -0.62
CARMIL3-201ENST00000342740 TSPEAR-AS2P59090 65 aa11.15□□□□□ -0.62
CARMIL3-201ENST00000342740 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
CARMIL3-201ENST00000342740 COX6A2Q02221 97 aa11.15□□□□□ -0.62
CARMIL3-201ENST00000342740 B5MCH6 92 aa11.15□□□□□ -0.62
CARMIL3-201ENST00000342740 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.63
CARMIL3-201ENST00000342740 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
CARMIL3-201ENST00000342740 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
CARMIL3-201ENST00000342740 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
CARMIL3-201ENST00000342740 Q6ZTC4 211 aa11.14□□□□□ -0.63
CARMIL3-201ENST00000342740 UNC80Q8N2C7 3258 aa11.14□□□□□ -0.63
CARMIL3-201ENST00000342740 ZNF292O60281 2723 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 NDUFS5O43920 106 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 BPTFQ12830 3046 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 A0A087WZ39 114 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 ATOX1O00244 68 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 NDUFB1O75438 58 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
CARMIL3-201ENST00000342740 LST1O00453 97 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 TRAV23DV6A0A075B6W5 121 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 FAM19A1Q7Z5A9 133 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 UNQ6190/PRO20217Q6UXQ8 127 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 SMIM11BQ8TCY0 68 aa11.12□□□□□ -0.63
CARMIL3-201ENST00000342740 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
CARMIL3-201ENST00000342740 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
CARMIL3-201ENST00000342740 COX17Q14061 63 aa11.11□□□□□ -0.63
CARMIL3-201ENST00000342740 MUC4Q99102 2169 aa11.11□□□□□ -0.63
CARMIL3-201ENST00000342740 LINC00315P59091 139 aa11.11□□□□□ -0.63
CARMIL3-201ENST00000342740 FHL3Q13643 280 aa11.1□□□□□ -0.63
CARMIL3-201ENST00000342740 Q6ZQY7 126 aa11.09□□□□□ -0.63
CARMIL3-201ENST00000342740 A0A096LNI7 61 aa11.09□□□□□ -0.63
CARMIL3-201ENST00000342740 MGAQ8IWI9 3026 aa11.09□□□□□ -0.63
CARMIL3-201ENST00000342740 M0R378 163 aa11.09□□□□□ -0.63
CARMIL3-201ENST00000342740 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 FSHBP01225 129 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 M0R2N4 97 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 MT-ATP8P03928 68 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 MGAM2Q2M2H8 2515 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 KLK9Q2XQG4 91 aa11.08□□□□□ -0.64
CARMIL3-201ENST00000342740 C9orf116Q5BN46 136 aaPredicted RBP11.07□□□□□ -0.64
CARMIL3-201ENST00000342740 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms