RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ORMDL2Q53FV1 153 aa10.64□□□□□ -0.71
PBX3-201ENST00000342287 DEFB104AQ8WTQ1 72 aa10.64□□□□□ -0.71
PBX3-201ENST00000342287 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
PBX3-201ENST00000342287 COX6CP09669 75 aa10.63□□□□□ -0.71
PBX3-201ENST00000342287 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
PBX3-201ENST00000342287 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
PBX3-201ENST00000342287 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
PBX3-201ENST00000342287 C5orf38Q86SI9 138 aa10.63□□□□□ -0.71
PBX3-201ENST00000342287 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
PBX3-201ENST00000342287 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
PBX3-201ENST00000342287 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
PBX3-201ENST00000342287 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
PBX3-201ENST00000342287 A0A0U1RQV1 116 aa10.62□□□□□ -0.71
PBX3-201ENST00000342287 NXPH4O95158 308 aa10.61□□□□□ -0.71
PBX3-201ENST00000342287 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
PBX3-201ENST00000342287 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
PBX3-201ENST00000342287 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 INSP01308 110 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 CXCL5P42830 114 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 C9orf66Q5T8R8 295 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 PRSS2P07478 247 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 AMELXQ99217 191 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 JMJD1CQ15652 2540 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 C1orf195Q5TG92 126 aa10.6□□□□□ -0.71
PBX3-201ENST00000342287 HTN1P15515 57 aa10.59□□□□□ -0.71
PBX3-201ENST00000342287 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
PBX3-201ENST00000342287 LINC00467Q9BRT7 94 aa10.59□□□□□ -0.71
PBX3-201ENST00000342287 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
PBX3-201ENST00000342287 LST1O00453 97 aa10.58□□□□□ -0.72
PBX3-201ENST00000342287 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
PBX3-201ENST00000342287 KRTAP24-1Q3LI83 254 aa10.58□□□□□ -0.72
PBX3-201ENST00000342287 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
PBX3-201ENST00000342287 RPL39LQ96EH5 51 aaKnown RBP10.58□□□□□ -0.72
PBX3-201ENST00000342287 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
PBX3-201ENST00000342287 SERP2Q8N6R1 65 aa10.58□□□□□ -0.72
PBX3-201ENST00000342287 PAPPA-AS1Q5QFB9 102 aa10.57□□□□□ -0.72
PBX3-201ENST00000342287 SPATA3Q8NHX4 192 aa10.57□□□□□ -0.72
PBX3-201ENST00000342287 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
PBX3-201ENST00000342287 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
PBX3-201ENST00000342287 NPC2P61916 151 aa10.56□□□□□ -0.72
PBX3-201ENST00000342287 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
PBX3-201ENST00000342287 KIF25-AS1Q9Y6Z4 181 aa10.55□□□□□ -0.72
PBX3-201ENST00000342287 TENM1Q9UKZ4 2725 aa10.55□□□□□ -0.72
PBX3-201ENST00000342287 I3L3M4 83 aa10.55□□□□□ -0.72
PBX3-201ENST00000342287 TIMM21Q9BVV7 248 aa10.55□□□□□ -0.72
PBX3-201ENST00000342287 TEP1Q99973 2627 aaKnown RBP10.55□□□□□ -0.72
PBX3-201ENST00000342287 MGPP08493 103 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 MUC4Q99102 2169 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 ATRQ13535 2644 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 TSHBP01222 138 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 PRM2P04554 102 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 LINC00315P59091 139 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 LINC01561Q8N1V8 128 aa10.54□□□□□ -0.72
PBX3-201ENST00000342287 A0A087WVE0 104 aa10.53□□□□□ -0.72
PBX3-201ENST00000342287 IGKV3D-7A0A0C4DH55 119 aa10.53□□□□□ -0.72
PBX3-201ENST00000342287 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
PBX3-201ENST00000342287 GIG44P09565 113 aaPredicted RBP10.53□□□□□ -0.72
PBX3-201ENST00000342287 FHL2Q14192 279 aa10.53□□□□□ -0.72
PBX3-201ENST00000342287 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 A0A087WWL8 130 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 PPP1R17O96001 155 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
PBX3-201ENST00000342287 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
PBX3-201ENST00000342287 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
PBX3-201ENST00000342287 DAZ2Q13117 558 aaKnown RBP10.51□□□□□ -0.73
PBX3-201ENST00000342287 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
PBX3-201ENST00000342287 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
PBX3-201ENST00000342287 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
PBX3-201ENST00000342287 BRK1Q8WUW1 75 aa10.51□□□□□ -0.73
PBX3-201ENST00000342287 F5H697 171 aa10.5□□□□□ -0.73
PBX3-201ENST00000342287 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
PBX3-201ENST00000342287 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
PBX3-201ENST00000342287 TIRAPP58753 221 aa10.49□□□□□ -0.73
PBX3-201ENST00000342287 VWFP04275 2813 aa10.49□□□□□ -0.73
PBX3-201ENST00000342287 LEPROTO15243 131 aa10.48□□□□□ -0.73
PBX3-201ENST00000342287 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
PBX3-201ENST00000342287 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
PBX3-201ENST00000342287 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
PBX3-201ENST00000342287 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
PBX3-201ENST00000342287 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
PBX3-201ENST00000342287 ADAMTSL4-AS1Q5T5F5 129 aa10.45□□□□□ -0.74
PBX3-201ENST00000342287 OPRPNQ99935 248 aaPredicted RBP10.45□□□□□ -0.74
PBX3-201ENST00000342287 M0QY20 66 aa10.45□□□□□ -0.74
PBX3-201ENST00000342287 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
PBX3-201ENST00000342287 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
PBX3-201ENST00000342287 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
PBX3-201ENST00000342287 FBN1P35555 2871 aaKnown RBP10.44□□□□□ -0.74
PBX3-201ENST00000342287 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
PBX3-201ENST00000342287 SDHAF1A6NFY7 115 aa10.43□□□□□ -0.74
PBX3-201ENST00000342287 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
PBX3-201ENST00000342287 TRGV1A0A0A0MS02 117 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 NDUFC2O95298 119 aa10.42□□□□□ -0.74
PBX3-201ENST00000342287 POLR2KP53803 58 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms