RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TRGV2A0A075B6R0 118 aa14.26□□□□□ -0.13
SPG7-202ENST00000341316 IGLV5-45A0A087WSX0 123 aa14.26□□□□□ -0.13
SPG7-202ENST00000341316 TEX49A0A1B0GTD5 131 aa14.26□□□□□ -0.13
SPG7-202ENST00000341316 NSD1Q96L73 2696 aaPredicted RBP14.26□□□□□ -0.13
SPG7-202ENST00000341316 TRAV26-1A0A087WT03 109 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 TIRAPP58753 221 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 DAND5Q8N907 189 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 LINC01600Q96MT4 127 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 OVOL2Q9BRP0 275 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 TENM1Q9UKZ4 2725 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 LINC00242Q5T6M2 205 aa14.25□□□□□ -0.13
SPG7-202ENST00000341316 LINC00482Q8N8I6 264 aa14.24□□□□□ -0.13
SPG7-202ENST00000341316 SPATA3Q8NHX4 192 aa14.24□□□□□ -0.13
SPG7-202ENST00000341316 TMEM101Q96IK0 257 aa14.24□□□□□ -0.13
SPG7-202ENST00000341316 PF4P02776 101 aa14.23□□□□□ -0.13
SPG7-202ENST00000341316 RPL13AP40429 203 aaKnown RBP14.23□□□□□ -0.13
SPG7-202ENST00000341316 CLEC2BQ92478 149 aa14.23□□□□□ -0.13
SPG7-202ENST00000341316 CITED1Q99966 193 aa14.23□□□□□ -0.13
SPG7-202ENST00000341316 C2orf82Q6UX34 121 aa14.22□□□□□ -0.13
SPG7-202ENST00000341316 CSDC2Q9Y534 153 aaKnown RBP14.22□□□□□ -0.13
SPG7-202ENST00000341316 H7C423 109 aa14.22□□□□□ -0.13
SPG7-202ENST00000341316 COX6CP09669 75 aa14.22□□□□□ -0.13
SPG7-202ENST00000341316 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
SPG7-202ENST00000341316 NBEAL2Q6ZNJ1 2754 aa14.22□□□□□ -0.13
SPG7-202ENST00000341316 TIMM17BO60830 172 aa14.21□□□□□ -0.13
SPG7-202ENST00000341316 TRAV13-1A0A0B4J241 112 aa14.21□□□□□ -0.14
SPG7-202ENST00000341316 CDC42SE2Q9NRR3 84 aa14.21□□□□□ -0.14
SPG7-202ENST00000341316 NDUFA1O15239 70 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 RNF183Q96D59 192 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 HIVEP1P15822 2718 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 TRAV8-4A0A0B4J246 113 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 TRBV6-4A0A1B0GX49 114 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 IFITM1P13164 125 aa14.2□□□□□ -0.14
SPG7-202ENST00000341316 TRGV4A0A0C4DH28 118 aa14.19□□□□□ -0.14
SPG7-202ENST00000341316 HERVK_113P63121 156 aa14.19□□□□□ -0.14
SPG7-202ENST00000341316 FHL2Q14192 279 aa14.19□□□□□ -0.14
SPG7-202ENST00000341316 FAM19A3Q7Z5A8 133 aa14.19□□□□□ -0.14
SPG7-202ENST00000341316 INAFM1C9JVW0 142 aa14.18□□□□□ -0.14
SPG7-202ENST00000341316 IGLV5-39A0A0G2JS06 123 aa14.18□□□□□ -0.14
SPG7-202ENST00000341316 CRLF1O75462 422 aa14.18□□□□□ -0.14
SPG7-202ENST00000341316 LST1O00453 97 aa14.17□□□□□ -0.14
SPG7-202ENST00000341316 SNCGO76070 127 aa14.17□□□□□ -0.14
SPG7-202ENST00000341316 ANAPC13Q9BS18 74 aa14.17□□□□□ -0.14
SPG7-202ENST00000341316 TMEM243Q9BU79 118 aa14.17□□□□□ -0.14
SPG7-202ENST00000341316 H3BT86 120 aa14.17□□□□□ -0.14
SPG7-202ENST00000341316 TRRAPQ9Y4A5 3859 aa14.16□□□□□ -0.14
SPG7-202ENST00000341316 Q9H8V8 135 aa14.16□□□□□ -0.14
SPG7-202ENST00000341316 SMIM1B2RUZ4 78 aa14.16□□□□□ -0.14
SPG7-202ENST00000341316 ZNF625Q96I27 306 aaPredicted RBP14.16□□□□□ -0.14
SPG7-202ENST00000341316 A0A0U1RRA0 63 aa14.15□□□□□ -0.14
SPG7-202ENST00000341316 UBE2L6O14933 153 aa14.15□□□□□ -0.14
SPG7-202ENST00000341316 CIRBPQ14011 172 aaKnown RBP14.15□□□□□ -0.14
SPG7-202ENST00000341316 DEFB130BP0DP73 79 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 DEFB130AP0DP74 79 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 GAGE2BQ13066 116 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 GAGE2EQ4V326 116 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 LINC00308Q8TCZ7 52 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 GAGE2DQ9UEU5 116 aa14.14□□□□□ -0.15
SPG7-202ENST00000341316 F5H768 121 aa14.13□□□□□ -0.15
SPG7-202ENST00000341316 ATRQ13535 2644 aa14.13□□□□□ -0.15
SPG7-202ENST00000341316 GAGE6Q13070 117 aa14.12□□□□□ -0.15
SPG7-202ENST00000341316 C15orf53Q8NAA6 179 aa14.12□□□□□ -0.15
SPG7-202ENST00000341316 X6R8D5 127 aa14.11□□□□□ -0.15
SPG7-202ENST00000341316 IGLV4-60A0A075B6I1 120 aa14.1□□□□□ -0.15
SPG7-202ENST00000341316 TRBV6-8A0A0A6YYG3 113 aa14.1□□□□□ -0.15
SPG7-202ENST00000341316 SOSTDC1Q6X4U4 206 aa14.1□□□□□ -0.15
SPG7-202ENST00000341316 NHLRC4P0CG21 123 aaPredicted RBP14.09□□□□□ -0.15
SPG7-202ENST00000341316 LINC00612Q8N6U2 182 aa14.09□□□□□ -0.15
SPG7-202ENST00000341316 KIR2DL5BQ8NHK3 375 aa14.09□□□□□ -0.15
SPG7-202ENST00000341316 NDUFV3P56181 108 aaKnown RBP14.07□□□□□ -0.16
SPG7-202ENST00000341316 MEIG1Q5JSS6 88 aa14.07□□□□□ -0.16
SPG7-202ENST00000341316 PRIMA1Q86XR5 153 aa14.07□□□□□ -0.16
SPG7-202ENST00000341316 IGKV3OR2-268A0A0C4DH90 116 aa14.06□□□□□ -0.16
SPG7-202ENST00000341316 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
SPG7-202ENST00000341316 DEFB121Q5J5C9 76 aa14.06□□□□□ -0.16
SPG7-202ENST00000341316 Q6Q795 121 aa14.06□□□□□ -0.16
SPG7-202ENST00000341316 CHCHD5Q9BSY4 110 aa14.06□□□□□ -0.16
SPG7-202ENST00000341316 C9orf66Q5T8R8 295 aa14.05□□□□□ -0.16
SPG7-202ENST00000341316 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
SPG7-202ENST00000341316 COX7A2LO14548 114 aa14.04□□□□□ -0.16
SPG7-202ENST00000341316 GYPEP15421 78 aa14.03□□□□□ -0.16
SPG7-202ENST00000341316 COPS9Q8WXC6 57 aa14.03□□□□□ -0.16
SPG7-202ENST00000341316 FAM240AA0A1B0GVK7 77 aa14.02□□□□□ -0.16
SPG7-202ENST00000341316 SHISA2Q6UWI4 295 aa14.02□□□□□ -0.16
SPG7-202ENST00000341316 DEFB4AO15263 64 aa14.01□□□□□ -0.17
SPG7-202ENST00000341316 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
SPG7-202ENST00000341316 SMIM9A6NGZ8 99 aa14□□□□□ -0.17
SPG7-202ENST00000341316 MRPL23Q16540 153 aaKnown RBP14□□□□□ -0.17
SPG7-202ENST00000341316 DEFB135Q30KP9 77 aa14□□□□□ -0.17
SPG7-202ENST00000341316 HERV-K104P63124 156 aa13.99□□□□□ -0.17
SPG7-202ENST00000341316 IGHV3OR16-9A0A0B4J2B5 98 aa13.98□□□□□ -0.17
SPG7-202ENST00000341316 A0A096LPF7 62 aa13.98□□□□□ -0.17
SPG7-202ENST00000341316 B5MCH6 92 aa13.97□□□□□ -0.17
SPG7-202ENST00000341316 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
SPG7-202ENST00000341316 PRO0255Q9UI72 69 aa13.97□□□□□ -0.17
SPG7-202ENST00000341316 TOMM7Q9P0U1 55 aa13.96□□□□□ -0.17
SPG7-202ENST00000341316 SS18L2Q9UHA2 77 aa13.96□□□□□ -0.17
SPG7-202ENST00000341316 CCDC179H3BU77 68 aa13.95□□□□□ -0.18
SPG7-202ENST00000341316 C5orf38Q86SI9 138 aa13.94□□□□□ -0.18
SPG7-202ENST00000341316 FAM218AQ96MZ4 157 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms