RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NDUFV3P56181 108 aaKnown RBP10.33□□□□□ -0.76
CPSF7-201ENST00000340437 Q9HAA7 133 aa10.33□□□□□ -0.76
CPSF7-201ENST00000340437 HERVK_113P63121 156 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 UNC79Q9P2D8 2635 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 LST1O00453 97 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 RS1O15537 224 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 NOTCH1P46531 2555 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 NTM-AS1Q6ZSK4 140 aa10.32□□□□□ -0.76
CPSF7-201ENST00000340437 NDUFA1O15239 70 aa10.31□□□□□ -0.76
CPSF7-201ENST00000340437 DEFB4AO15263 64 aa10.31□□□□□ -0.76
CPSF7-201ENST00000340437 CITED1Q99966 193 aa10.31□□□□□ -0.76
CPSF7-201ENST00000340437 PFN2P35080 140 aa10.31□□□□□ -0.76
CPSF7-201ENST00000340437 PF4P02776 101 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 LINC00158P58513 81 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 DEFB113Q30KQ7 82 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 DNAJC30Q96LL9 226 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 K7EQD1 137 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 ZNF843Q8N446 348 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
CPSF7-201ENST00000340437 A0A096LNT2 108 aa10.29□□□□□ -0.76
CPSF7-201ENST00000340437 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
CPSF7-201ENST00000340437 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-201ENST00000340437 TIRAPP58753 221 aa10.29□□□□□ -0.76
CPSF7-201ENST00000340437 C5orf38Q86SI9 138 aa10.29□□□□□ -0.76
CPSF7-201ENST00000340437 H3BT86 120 aa10.28□□□□□ -0.76
CPSF7-201ENST00000340437 CCL24O00175 119 aa10.28□□□□□ -0.76
CPSF7-201ENST00000340437 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
CPSF7-201ENST00000340437 BAALC-AS2P0C853 105 aa10.28□□□□□ -0.76
CPSF7-201ENST00000340437 TMEM243Q9BU79 118 aa10.27□□□□□ -0.77
CPSF7-201ENST00000340437 BEAN1Q3B7T3 259 aa10.27□□□□□ -0.77
CPSF7-201ENST00000340437 MIR7-3HGQ8N6C7 128 aa10.27□□□□□ -0.77
CPSF7-201ENST00000340437 DAZ2Q13117 558 aaKnown RBP10.26□□□□□ -0.77
CPSF7-201ENST00000340437 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
CPSF7-201ENST00000340437 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
CPSF7-201ENST00000340437 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
CPSF7-201ENST00000340437 CDC42SE2Q9NRR3 84 aa10.26□□□□□ -0.77
CPSF7-201ENST00000340437 ATP5G1P05496 136 aa10.25□□□□□ -0.77
CPSF7-201ENST00000340437 COX7A2LO14548 114 aa10.24□□□□□ -0.77
CPSF7-201ENST00000340437 FAM218AQ96MZ4 157 aa10.24□□□□□ -0.77
CPSF7-201ENST00000340437 EDA2RQ9HAV5 297 aa10.24□□□□□ -0.77
CPSF7-201ENST00000340437 CRPP02741 224 aa10.23□□□□□ -0.77
CPSF7-201ENST00000340437 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
CPSF7-201ENST00000340437 ZNF469Q96JG9 3925 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-201ENST00000340437 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
CPSF7-201ENST00000340437 PAX4O43316 350 aa10.23□□□□□ -0.77
CPSF7-201ENST00000340437 CR1P17927 2039 aa10.23□□□□□ -0.77
CPSF7-201ENST00000340437 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
CPSF7-201ENST00000340437 TIMM17BO60830 172 aa10.22□□□□□ -0.77
CPSF7-201ENST00000340437 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
CPSF7-201ENST00000340437 SND1-IT1Q9HBX3 110 aa10.22□□□□□ -0.77
CPSF7-201ENST00000340437 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.77
CPSF7-201ENST00000340437 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.77
CPSF7-201ENST00000340437 M0QXV9 152 aa10.21□□□□□ -0.77
CPSF7-201ENST00000340437 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
CPSF7-201ENST00000340437 IGLV5-45A0A087WSX0 123 aa10.21□□□□□ -0.77
CPSF7-201ENST00000340437 DNAL4O96015 105 aa10.21□□□□□ -0.77
CPSF7-201ENST00000340437 STAB1Q9NY15 2570 aa10.21□□□□□ -0.78
CPSF7-201ENST00000340437 HIVEP1P15822 2718 aa10.21□□□□□ -0.78
CPSF7-201ENST00000340437 COX7B2Q8TF08 81 aa10.21□□□□□ -0.78
CPSF7-201ENST00000340437 FSHBP01225 129 aa10.2□□□□□ -0.78
CPSF7-201ENST00000340437 XCL1P47992 114 aa10.2□□□□□ -0.78
CPSF7-201ENST00000340437 NBPF19A0A087WUL8 3843 aa10.2□□□□□ -0.78
CPSF7-201ENST00000340437 A8MTW9 85 aa10.2□□□□□ -0.78
CPSF7-201ENST00000340437 SLPIP03973 132 aa10.2□□□□□ -0.78
CPSF7-201ENST00000340437 AKAP9Q99996 3911 aa10.19□□□□□ -0.78
CPSF7-201ENST00000340437 F5H768 121 aa10.19□□□□□ -0.78
CPSF7-201ENST00000340437 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
CPSF7-201ENST00000340437 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
CPSF7-201ENST00000340437 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
CPSF7-201ENST00000340437 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
CPSF7-201ENST00000340437 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
CPSF7-201ENST00000340437 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
CPSF7-201ENST00000340437 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
CPSF7-201ENST00000340437 A0A087WYN8 130 aa10.16□□□□□ -0.78
CPSF7-201ENST00000340437 HERV-K104P63124 156 aa10.16□□□□□ -0.78
CPSF7-201ENST00000340437 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
CPSF7-201ENST00000340437 LECT2O14960 151 aa10.15□□□□□ -0.78
CPSF7-201ENST00000340437 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
CPSF7-201ENST00000340437 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.78
CPSF7-201ENST00000340437 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.78
CPSF7-201ENST00000340437 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
CPSF7-201ENST00000340437 COL6A5A8TX70 2615 aa10.14□□□□□ -0.79
CPSF7-201ENST00000340437 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
CPSF7-201ENST00000340437 GIG44P09565 113 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-201ENST00000340437 CCL18P55774 89 aa10.14□□□□□ -0.79
CPSF7-201ENST00000340437 IGKV3D-7A0A0C4DH55 119 aa10.13□□□□□ -0.79
CPSF7-201ENST00000340437 MALP21145 153 aa10.13□□□□□ -0.79
CPSF7-201ENST00000340437 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
CPSF7-201ENST00000340437 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
CPSF7-201ENST00000340437 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
CPSF7-201ENST00000340437 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
CPSF7-201ENST00000340437 GYPEP15421 78 aa10.12□□□□□ -0.79
CPSF7-201ENST00000340437 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
CPSF7-201ENST00000340437 LINC01006Q8NI28 216 aa10.12□□□□□ -0.79
CPSF7-201ENST00000340437 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
CPSF7-201ENST00000340437 NCR3O14931 201 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms