RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 UBE2BP63146 152 aa13.39□□□□□ -0.27
FGFR3-202ENST00000340107 LINC00308Q8TCZ7 52 aa13.39□□□□□ -0.27
FGFR3-202ENST00000340107 BOD1L1Q8NFC6 3051 aa13.39□□□□□ -0.27
FGFR3-202ENST00000340107 PRB2P02812 416 aaPredicted RBP13.38□□□□□ -0.27
FGFR3-202ENST00000340107 TIRAPP58753 221 aa13.38□□□□□ -0.27
FGFR3-202ENST00000340107 SPANXCQ9NY87 97 aa13.38□□□□□ -0.27
FGFR3-202ENST00000340107 A0A0B4J2C4 111 aa13.37□□□□□ -0.27
FGFR3-202ENST00000340107 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
FGFR3-202ENST00000340107 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
FGFR3-202ENST00000340107 CXCL5P42830 114 aa13.37□□□□□ -0.27
FGFR3-202ENST00000340107 MIFP14174 115 aa13.36□□□□□ -0.27
FGFR3-202ENST00000340107 G3V4G9 280 aa13.36□□□□□ -0.27
FGFR3-202ENST00000340107 IGLV2-18A0A075B6J9 118 aa13.35□□□□□ -0.27
FGFR3-202ENST00000340107 SPANXB1Q9NS25 103 aaPredicted RBP13.35□□□□□ -0.27
FGFR3-202ENST00000340107 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
FGFR3-202ENST00000340107 COL27A1Q8IZC6 1860 aaPredicted RBP13.35□□□□□ -0.27
FGFR3-202ENST00000340107 TRIAP1O43715 76 aa13.35□□□□□ -0.27
FGFR3-202ENST00000340107 ETDCA0A1B0GVM5 59 aa13.34□□□□□ -0.27
FGFR3-202ENST00000340107 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
FGFR3-202ENST00000340107 H3BT86 120 aa13.34□□□□□ -0.27
FGFR3-202ENST00000340107 Q6ZSN1 163 aa13.34□□□□□ -0.27
FGFR3-202ENST00000340107 POM121L12Q8N7R1 296 aa13.34□□□□□ -0.27
FGFR3-202ENST00000340107 C9orf153Q5TBE3 101 aa13.33□□□□□ -0.28
FGFR3-202ENST00000340107 UBE2D3P61077 147 aa13.33□□□□□ -0.28
FGFR3-202ENST00000340107 UBE2D2P62837 147 aa13.33□□□□□ -0.28
FGFR3-202ENST00000340107 TEX49A0A1B0GTD5 131 aa13.33□□□□□ -0.28
FGFR3-202ENST00000340107 IGKV3D-7A0A0C4DH55 119 aa13.32□□□□□ -0.28
FGFR3-202ENST00000340107 UBE2D1P51668 147 aa13.32□□□□□ -0.28
FGFR3-202ENST00000340107 LINC00694P0DN24 101 aa13.32□□□□□ -0.28
FGFR3-202ENST00000340107 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
FGFR3-202ENST00000340107 IGHV4-30-4P0DP06 118 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 LINC00242Q5T6M2 205 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 IGLV4-69A0A075B6H9 119 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 H7C423 109 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 SHISA2Q6UWI4 295 aa13.3□□□□□ -0.28
FGFR3-202ENST00000340107 TSPEAR-AS2P59090 65 aa13.29□□□□□ -0.28
FGFR3-202ENST00000340107 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
FGFR3-202ENST00000340107 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
FGFR3-202ENST00000340107 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
FGFR3-202ENST00000340107 SLPIP03973 132 aa13.28□□□□□ -0.28
FGFR3-202ENST00000340107 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.28
FGFR3-202ENST00000340107 IGKV2-24A0A0C4DH68 120 aa13.27□□□□□ -0.28
FGFR3-202ENST00000340107 C14orf132Q9NPU4 83 aa13.27□□□□□ -0.28
FGFR3-202ENST00000340107 TEP1Q99973 2627 aaKnown RBP13.27□□□□□ -0.29
FGFR3-202ENST00000340107 KIF25-AS1Q9Y6Z4 181 aa13.27□□□□□ -0.29
FGFR3-202ENST00000340107 KPRPQ5T749 579 aaPredicted RBP13.27□□□□□ -0.29
FGFR3-202ENST00000340107 DIRC1Q969H9 104 aa13.27□□□□□ -0.29
FGFR3-202ENST00000340107 CHCHD7Q9BUK0 85 aa13.26□□□□□ -0.29
FGFR3-202ENST00000340107 UFSP1Q6NVU6 142 aa13.25□□□□□ -0.29
FGFR3-202ENST00000340107 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
FGFR3-202ENST00000340107 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
FGFR3-202ENST00000340107 ACYP1P07311 99 aa13.24□□□□□ -0.29
FGFR3-202ENST00000340107 hADV29S1A0JD25 119 aa13.24□□□□□ -0.29
FGFR3-202ENST00000340107 CHD6Q8TD26 2715 aa13.24□□□□□ -0.29
FGFR3-202ENST00000340107 RETNQ9HD89 108 aa13.24□□□□□ -0.29
FGFR3-202ENST00000340107 COX6A2Q02221 97 aa13.23□□□□□ -0.29
FGFR3-202ENST00000340107 B5MCH6 92 aa13.23□□□□□ -0.29
FGFR3-202ENST00000340107 CDK2AP2O75956 126 aa13.23□□□□□ -0.29
FGFR3-202ENST00000340107 TRACP01848 142 aa13.23□□□□□ -0.29
FGFR3-202ENST00000340107 ADGRG4Q8IZF6 3080 aa13.22□□□□□ -0.29
FGFR3-202ENST00000340107 CD164L2Q6UWJ8 174 aa13.22□□□□□ -0.29
FGFR3-202ENST00000340107 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
FGFR3-202ENST00000340107 Q9UF83 564 aa13.22□□□□□ -0.29
FGFR3-202ENST00000340107 C6orf99Q4VX62 202 aa13.21□□□□□ -0.29
FGFR3-202ENST00000340107 FAM236AA0A1B0GUQ0 79 aa13.2□□□□□ -0.3
FGFR3-202ENST00000340107 FAM236BA0A1B0GV22 79 aa13.2□□□□□ -0.3
FGFR3-202ENST00000340107 LINC00315P59091 139 aa13.2□□□□□ -0.3
FGFR3-202ENST00000340107 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 RBM3P98179 157 aaKnown RBP13.19□□□□□ -0.3
FGFR3-202ENST00000340107 BEAN1Q3B7T3 259 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 FHL2Q14192 279 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 C16orf95Q9H693 158 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 ATMQ13315 3056 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 MT-ATP8P03928 68 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 JMJD7-PLA2G4BH0Y9G9 81 aa13.19□□□□□ -0.3
FGFR3-202ENST00000340107 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
FGFR3-202ENST00000340107 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
FGFR3-202ENST00000340107 LELP1Q5T871 98 aa13.18□□□□□ -0.3
FGFR3-202ENST00000340107 TMEM256-PLSCR3K7ERE1 68 aa13.17□□□□□ -0.3
FGFR3-202ENST00000340107 TIMM17BO60830 172 aa13.17□□□□□ -0.3
FGFR3-202ENST00000340107 ADAMTSL4-AS1Q5T5F5 129 aa13.17□□□□□ -0.3
FGFR3-202ENST00000340107 AMELXQ99217 191 aa13.17□□□□□ -0.3
FGFR3-202ENST00000340107 COX7BP24311 80 aa13.16□□□□□ -0.3
FGFR3-202ENST00000340107 FUSP35637 526 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■□□□ 12.3
FGFR3-202ENST00000340107 Q8N2B8 174 aa13.16□□□□□ -0.3
FGFR3-202ENST00000340107 DMXL2Q8TDJ6 3036 aa13.16□□□□□ -0.3
FGFR3-202ENST00000340107 REV3LO60673 3130 aa13.16□□□□□ -0.3
FGFR3-202ENST00000340107 A0A0J9YWU9 116 aa13.15□□□□□ -0.3
FGFR3-202ENST00000340107 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
FGFR3-202ENST00000340107 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
FGFR3-202ENST00000340107 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
FGFR3-202ENST00000340107 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
FGFR3-202ENST00000340107 SYCNQ0VAF6 134 aa13.13□□□□□ -0.31
FGFR3-202ENST00000340107 UNQ6190/PRO20217Q6UXQ8 127 aa13.12□□□□□ -0.31
FGFR3-202ENST00000340107 HIGD2AQ9BW72 106 aa13.12□□□□□ -0.31
FGFR3-202ENST00000340107 NREPQ16612 68 aa13.12□□□□□ -0.31
FGFR3-202ENST00000340107 A0A1B0GX51 115 aa13.12□□□□□ -0.31
FGFR3-202ENST00000340107 SMIM11BQ8TCY0 68 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms