RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.59
SCNN1A-202ENST00000338748 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
SCNN1A-202ENST00000338748 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
SCNN1A-202ENST00000338748 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 CFC1P0CG37 223 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 PRIMA1Q86XR5 153 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 TENM3Q9P273 2699 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 F5H768 121 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 H7C423 109 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 RNF183Q96D59 192 aa11.32□□□□□ -0.6
SCNN1A-202ENST00000338748 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
SCNN1A-202ENST00000338748 A4D1N5 150 aa11.31□□□□□ -0.6
SCNN1A-202ENST00000338748 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
SCNN1A-202ENST00000338748 PAX4O43316 350 aa11.31□□□□□ -0.6
SCNN1A-202ENST00000338748 MIFP14174 115 aa11.31□□□□□ -0.6
SCNN1A-202ENST00000338748 DAD1P61803 113 aa11.3□□□□□ -0.6
SCNN1A-202ENST00000338748 SMAGPQ0VAQ4 97 aa11.3□□□□□ -0.6
SCNN1A-202ENST00000338748 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
SCNN1A-202ENST00000338748 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
SCNN1A-202ENST00000338748 TSPAN13O95857 204 aa11.29□□□□□ -0.6
SCNN1A-202ENST00000338748 PCP4P48539 62 aa11.28□□□□□ -0.6
SCNN1A-202ENST00000338748 RETNQ9HD89 108 aa11.28□□□□□ -0.6
SCNN1A-202ENST00000338748 NPC2P61916 151 aa11.28□□□□□ -0.6
SCNN1A-202ENST00000338748 DAND5Q8N907 189 aa11.28□□□□□ -0.6
SCNN1A-202ENST00000338748 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.6
SCNN1A-202ENST00000338748 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
SCNN1A-202ENST00000338748 NDUFA1O15239 70 aa11.27□□□□□ -0.61
SCNN1A-202ENST00000338748 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
SCNN1A-202ENST00000338748 Q9H8V8 135 aa11.27□□□□□ -0.61
SCNN1A-202ENST00000338748 K7ERU9 68 aa11.26□□□□□ -0.61
SCNN1A-202ENST00000338748 HTN3P15516 51 aa11.26□□□□□ -0.61
SCNN1A-202ENST00000338748 Q8N3U1 123 aa11.26□□□□□ -0.61
SCNN1A-202ENST00000338748 VPS25Q9BRG1 176 aa11.26□□□□□ -0.61
SCNN1A-202ENST00000338748 PRSS2P07478 247 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 H3BMG7 143 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 ATP5G1P05496 136 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 EGFEM1PQ0D2K5 195 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 MIAQ16674 131 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
SCNN1A-202ENST00000338748 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
SCNN1A-202ENST00000338748 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
SCNN1A-202ENST00000338748 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
SCNN1A-202ENST00000338748 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
SCNN1A-202ENST00000338748 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
SCNN1A-202ENST00000338748 IGHV3OR16-9A0A0B4J2B5 98 aa11.23□□□□□ -0.61
SCNN1A-202ENST00000338748 MTURNQ8N3F0 131 aa11.23□□□□□ -0.61
SCNN1A-202ENST00000338748 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
SCNN1A-202ENST00000338748 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
SCNN1A-202ENST00000338748 G3V4G9 280 aa11.23□□□□□ -0.61
SCNN1A-202ENST00000338748 LINC00959A0A1B0GUT2 108 aa11.21□□□□□ -0.61
SCNN1A-202ENST00000338748 A0A0B4J2C4 111 aa11.21□□□□□ -0.62
SCNN1A-202ENST00000338748 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.62
SCNN1A-202ENST00000338748 IGHV3-33P01772 117 aa11.21□□□□□ -0.62
SCNN1A-202ENST00000338748 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.62
SCNN1A-202ENST00000338748 A0A1B0GUV1 79 aa11.2□□□□□ -0.62
SCNN1A-202ENST00000338748 TIMM17BO60830 172 aa11.2□□□□□ -0.62
SCNN1A-202ENST00000338748 H7C2G1 150 aa11.2□□□□□ -0.62
SCNN1A-202ENST00000338748 WFDC2Q14508 124 aa11.2□□□□□ -0.62
SCNN1A-202ENST00000338748 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
SCNN1A-202ENST00000338748 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
SCNN1A-202ENST00000338748 XCL1P47992 114 aa11.18□□□□□ -0.62
SCNN1A-202ENST00000338748 A0A087WZ39 114 aa11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 F8W1H4 67 aa11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
SCNN1A-202ENST00000338748 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 PRO0461Q9UI25 63 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 TCL1BO95988 128 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 LINC00308Q8TCZ7 52 aa11.16□□□□□ -0.62
SCNN1A-202ENST00000338748 PSMB2P49721 201 aa11.15□□□□□ -0.62
SCNN1A-202ENST00000338748 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
SCNN1A-202ENST00000338748 CFAP161Q6P656 301 aa11.15□□□□□ -0.62
SCNN1A-202ENST00000338748 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
SCNN1A-202ENST00000338748 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
SCNN1A-202ENST00000338748 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.63
SCNN1A-202ENST00000338748 PRB2P02812 416 aaPredicted RBP11.14□□□□□ -0.63
SCNN1A-202ENST00000338748 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
SCNN1A-202ENST00000338748 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
SCNN1A-202ENST00000338748 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-202ENST00000338748 IFITM1P13164 125 aa11.13□□□□□ -0.63
SCNN1A-202ENST00000338748 Q6ZTC4 211 aa11.13□□□□□ -0.63
SCNN1A-202ENST00000338748 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
SCNN1A-202ENST00000338748 HERV-K104P63124 156 aa11.12□□□□□ -0.63
SCNN1A-202ENST00000338748 SS18Q15532 418 aa11.12□□□□□ -0.63
SCNN1A-202ENST00000338748 Q1RN00 199 aa11.12□□□□□ -0.63
SCNN1A-202ENST00000338748 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
SCNN1A-202ENST00000338748 ETDBQ3ZM63 59 aa11.12□□□□□ -0.63
SCNN1A-202ENST00000338748 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
SCNN1A-202ENST00000338748 TRIAP1O43715 76 aa11.11□□□□□ -0.63
SCNN1A-202ENST00000338748 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms