RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 TRGV4A0A0C4DH28 118 aa15.21■□□□□ 0.03
PTDSS1-201ENST00000337004 LINC01006Q8NI28 216 aa15.21■□□□□ 0.03
PTDSS1-201ENST00000337004 LOC100131303A0A0U1RQF7 123 aa15.2■□□□□ 0.02
PTDSS1-201ENST00000337004 Q6Q795 121 aa15.2■□□□□ 0.02
PTDSS1-201ENST00000337004 CENPEQ02224 2701 aa15.2■□□□□ 0.02
PTDSS1-201ENST00000337004 MRPL23Q16540 153 aaKnown RBP15.2■□□□□ 0.02
PTDSS1-201ENST00000337004 WFDC10AQ9H1F0 79 aa15.2■□□□□ 0.02
PTDSS1-201ENST00000337004 UBR5O95071 2799 aaPredicted RBP15.19■□□□□ 0.02
PTDSS1-201ENST00000337004 IGLV1-51P01701 117 aa15.19■□□□□ 0.02
PTDSS1-201ENST00000337004 C16orf95Q9H693 158 aa15.18■□□□□ 0.02
PTDSS1-201ENST00000337004 C19orf73Q9NVV2 129 aa15.18■□□□□ 0.02
PTDSS1-201ENST00000337004 CSNK1G2-AS1Q8NCQ2 148 aa15.18■□□□□ 0.02
PTDSS1-201ENST00000337004 COX7B2Q8TF08 81 aa15.18■□□□□ 0.02
PTDSS1-201ENST00000337004 TTC32Q5I0X7 151 aa15.17■□□□□ 0.02
PTDSS1-201ENST00000337004 ABCA12Q86UK0 2595 aa15.17■□□□□ 0.02
PTDSS1-201ENST00000337004 GAGE6Q13070 117 aa15.17■□□□□ 0.02
PTDSS1-201ENST00000337004 TRACP01848 142 aa15.16■□□□□ 0.02
PTDSS1-201ENST00000337004 PF4P02776 101 aa15.16■□□□□ 0.02
PTDSS1-201ENST00000337004 TRAV13-2A0A0B4J235 113 aa15.15■□□□□ 0.02
PTDSS1-201ENST00000337004 RNASE1P07998 156 aaKnown RBP15.15■□□□□ 0.02
PTDSS1-201ENST00000337004 NDUFV3P56181 108 aaKnown RBP15.15■□□□□ 0.02
PTDSS1-201ENST00000337004 TRBV6-8A0A0A6YYG3 113 aa15.14■□□□□ 0.01
PTDSS1-201ENST00000337004 HIST2H2BCQ6DN03 193 aa15.14■□□□□ 0.01
PTDSS1-201ENST00000337004 ZFYVE26Q68DK2 2539 aa15.14■□□□□ 0.01
PTDSS1-201ENST00000337004 IGKV3OR2-268A0A0C4DH90 116 aa15.13■□□□□ 0.01
PTDSS1-201ENST00000337004 FHL2Q14192 279 aa15.13■□□□□ 0.01
PTDSS1-201ENST00000337004 TOMM7Q9P0U1 55 aa15.13■□□□□ 0.01
PTDSS1-201ENST00000337004 CHCHD5Q9BSY4 110 aa15.13■□□□□ 0.01
PTDSS1-201ENST00000337004 CHD6Q8TD26 2715 aa15.13■□□□□ 0.01
PTDSS1-201ENST00000337004 MIR7-3HGQ8N6C7 128 aa15.12■□□□□ 0.01
PTDSS1-201ENST00000337004 ACYP1P07311 99 aa15.12■□□□□ 0.01
PTDSS1-201ENST00000337004 PLA2G2AP14555 144 aa15.12■□□□□ 0.01
PTDSS1-201ENST00000337004 FAM222AQ5U5X8 452 aa15.12■□□□□ 0.01
PTDSS1-201ENST00000337004 USP24Q9UPU5 2620 aa15.12■□□□□ 0.01
PTDSS1-201ENST00000337004 IGLV4-60A0A075B6I1 120 aa15.11■□□□□ 0.01
PTDSS1-201ENST00000337004 CRPP02741 224 aa15.11■□□□□ 0.01
PTDSS1-201ENST00000337004 NHLRC4P0CG21 123 aaPredicted RBP15.11■□□□□ 0.01
PTDSS1-201ENST00000337004 IGHV3OR16-9A0A0B4J2B5 98 aa15.1■□□□□ 0.01
PTDSS1-201ENST00000337004 BAALC-AS2P0C853 105 aa15.1■□□□□ 0.01
PTDSS1-201ENST00000337004 RPL28P46779 137 aaKnown RBP15.1■□□□□ 0.01
PTDSS1-201ENST00000337004 SND1-IT1Q9HBX3 110 aa15.1■□□□□ 0.01
PTDSS1-201ENST00000337004 AKAP9Q99996 3911 aa15.1■□□□□ 0.01
PTDSS1-201ENST00000337004 LINC00158P58513 81 aa15.09■□□□□ 0.01
PTDSS1-201ENST00000337004 EPG5Q9HCE0 2579 aa15.09■□□□□ 0.01
PTDSS1-201ENST00000337004 ZNF469Q96JG9 3925 aaPredicted RBP15.08■□□□□ 0
PTDSS1-201ENST00000337004 WNK1Q9H4A3 2382 aa15.07■□□□□ 0
PTDSS1-201ENST00000337004 A0A087WZ39 114 aa15.07■□□□□ 0
PTDSS1-201ENST00000337004 FAM218AQ96MZ4 157 aa15.07■□□□□ 0
PTDSS1-201ENST00000337004 TLN2Q9Y4G6 2542 aa15.06■□□□□ 0
PTDSS1-201ENST00000337004 KRTAP1-1Q07627 177 aa15.06■□□□□ 0
PTDSS1-201ENST00000337004 LINC00337Q8N6G1 96 aa15.06■□□□□ 0
PTDSS1-201ENST00000337004 IBA57-AS1B1ANH7 110 aa15.05■□□□□ 0
PTDSS1-201ENST00000337004 SONP18583 2426 aaKnown RBP15.05■□□□□ -0
PTDSS1-201ENST00000337004 IGKV2-28A0A075B6P5 120 aa15.05■□□□□ -0
PTDSS1-201ENST00000337004 IGKV2D-28P01615 120 aa15.05■□□□□ -0
PTDSS1-201ENST00000337004 DEFB130BP0DP73 79 aa15.04■□□□□ -0
PTDSS1-201ENST00000337004 DEFB130AP0DP74 79 aa15.04■□□□□ -0
PTDSS1-201ENST00000337004 C5orf38Q86SI9 138 aa15.04■□□□□ -0
PTDSS1-201ENST00000337004 KIR2DL5BQ8NHK3 375 aa15.03■□□□□ -0
PTDSS1-201ENST00000337004 APCP25054 2843 aa15.02■□□□□ -0
PTDSS1-201ENST00000337004 TRBV7-7A0A0K0K1E9 115 aa15.02■□□□□ -0
PTDSS1-201ENST00000337004 ITPR3Q14573 2671 aa15.02■□□□□ -0
PTDSS1-201ENST00000337004 LINC00959A0A1B0GUT2 108 aa15.02□□□□□ -0.01
PTDSS1-201ENST00000337004 CCL18P55774 89 aa15.02□□□□□ -0.01
PTDSS1-201ENST00000337004 PFN2P35080 140 aa15□□□□□ -0.01
PTDSS1-201ENST00000337004 Q9HAA7 133 aa15□□□□□ -0.01
PTDSS1-201ENST00000337004 INAFM2P0DMQ5 153 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 SMIM11BQ8TCY0 68 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 MALP21145 153 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 HILS1P60008 231 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 C6orf226Q5I0X4 101 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 C22orf24Q9Y442 160 aa14.99□□□□□ -0.01
PTDSS1-201ENST00000337004 H0YGX0 51 aa14.98□□□□□ -0.01
PTDSS1-201ENST00000337004 DNAL4O96015 105 aa14.98□□□□□ -0.01
PTDSS1-201ENST00000337004 GYPEP15421 78 aa14.98□□□□□ -0.01
PTDSS1-201ENST00000337004 LINC00612Q8N6U2 182 aa14.98□□□□□ -0.01
PTDSS1-201ENST00000337004 C2CD3Q4AC94 2353 aa14.97□□□□□ -0.01
PTDSS1-201ENST00000337004 B5MCH6 92 aa14.97□□□□□ -0.01
PTDSS1-201ENST00000337004 IMUPQ9GZP8 106 aa14.97□□□□□ -0.01
PTDSS1-201ENST00000337004 SS18Q15532 418 aa14.97□□□□□ -0.01
PTDSS1-201ENST00000337004 A0A1B0GUV1 79 aa14.96□□□□□ -0.01
PTDSS1-201ENST00000337004 PAX4O43316 350 aa14.96□□□□□ -0.01
PTDSS1-201ENST00000337004 LINC00643Q86TS7 51 aa14.96□□□□□ -0.01
PTDSS1-201ENST00000337004 NOTCH3Q9UM47 2321 aa14.96□□□□□ -0.02
PTDSS1-201ENST00000337004 XCL1P47992 114 aa14.95□□□□□ -0.02
PTDSS1-201ENST00000337004 CCDC179H3BU77 68 aa14.94□□□□□ -0.02
PTDSS1-201ENST00000337004 NF1P21359 2839 aa14.93□□□□□ -0.02
PTDSS1-201ENST00000337004 A0A087WYN8 130 aa14.93□□□□□ -0.02
PTDSS1-201ENST00000337004 PRO0255Q9UI72 69 aa14.93□□□□□ -0.02
PTDSS1-201ENST00000337004 CUBNO60494 3623 aa14.92□□□□□ -0.02
PTDSS1-201ENST00000337004 SMCR5Q8TEV8 140 aa14.92□□□□□ -0.02
PTDSS1-201ENST00000337004 SMIM9A6NGZ8 99 aa14.92□□□□□ -0.02
PTDSS1-201ENST00000337004 OR13C6PQ8NH95 151 aa14.92□□□□□ -0.02
PTDSS1-201ENST00000337004 C11orf68Q9H3H3 251 aaKnown RBP14.92□□□□□ -0.02
PTDSS1-201ENST00000337004 CCDC168Q8NDH2 2452 aa14.91□□□□□ -0.02
PTDSS1-201ENST00000337004 SDIM1Q6ZPB5 146 aa14.91□□□□□ -0.02
PTDSS1-201ENST00000337004 Q8IZM0 81 aa14.91□□□□□ -0.02
PTDSS1-201ENST00000337004 SETXQ7Z333 2677 aaKnown RBP14.91□□□□□ -0.02
PTDSS1-201ENST00000337004 GAGE2AQ6NT46 116 aa14.91□□□□□ -0.02
PTDSS1-201ENST00000337004 SS18L2Q9UHA2 77 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms