RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TRBV10-1A0A0K0K1A3 114 aa14.16□□□□□ -0.14
CDCA4-201ENST00000336219 Q6ZTI0 123 aa14.16□□□□□ -0.14
CDCA4-201ENST00000336219 FAM19A3Q7Z5A8 133 aa14.16□□□□□ -0.14
CDCA4-201ENST00000336219 ZNF843Q8N446 348 aa14.16□□□□□ -0.14
CDCA4-201ENST00000336219 TRBV7-7A0A0K0K1E9 115 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 DNAJC9-AS1A6NH13 148 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 CCL24O00175 119 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 CSDC2Q9Y534 153 aaKnown RBP14.15□□□□□ -0.14
CDCA4-201ENST00000336219 NOTCH3Q9UM47 2321 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 C22orf24Q9Y442 160 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 EPG5Q9HCE0 2579 aa14.15□□□□□ -0.14
CDCA4-201ENST00000336219 FAM236AA0A1B0GUQ0 79 aa14.14□□□□□ -0.15
CDCA4-201ENST00000336219 FAM236BA0A1B0GV22 79 aa14.14□□□□□ -0.15
CDCA4-201ENST00000336219 F5H768 121 aa14.14□□□□□ -0.15
CDCA4-201ENST00000336219 SMIM20Q8N5G0 67 aa14.14□□□□□ -0.15
CDCA4-201ENST00000336219 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
CDCA4-201ENST00000336219 Q9HAA7 133 aa14.13□□□□□ -0.15
CDCA4-201ENST00000336219 CDC42SE2Q9NRR3 84 aa14.12□□□□□ -0.15
CDCA4-201ENST00000336219 SONP18583 2426 aaKnown RBP14.12□□□□□ -0.15
CDCA4-201ENST00000336219 APCP25054 2843 aa14.1□□□□□ -0.15
CDCA4-201ENST00000336219 ESM1Q9NQ30 184 aa14.1□□□□□ -0.15
CDCA4-201ENST00000336219 ITPR3Q14573 2671 aa14.1□□□□□ -0.15
CDCA4-201ENST00000336219 NOP10Q9NPE3 64 aaKnown RBP14.1□□□□□ -0.15
CDCA4-201ENST00000336219 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
CDCA4-201ENST00000336219 IGKV3OR2-268A0A0C4DH90 116 aa14.09□□□□□ -0.15
CDCA4-201ENST00000336219 LOC100131303A0A0U1RQF7 123 aa14.08□□□□□ -0.16
CDCA4-201ENST00000336219 GIG44P09565 113 aaPredicted RBP14.08□□□□□ -0.16
CDCA4-201ENST00000336219 TRACP01848 142 aa14.07□□□□□ -0.16
CDCA4-201ENST00000336219 WFDC11Q8NEX6 87 aa14.07□□□□□ -0.16
CDCA4-201ENST00000336219 NF1P21359 2839 aa14.07□□□□□ -0.16
CDCA4-201ENST00000336219 TOMM7Q9P0U1 55 aa14.07□□□□□ -0.16
CDCA4-201ENST00000336219 ACYP1P07311 99 aa14.06□□□□□ -0.16
CDCA4-201ENST00000336219 LINC00337Q8N6G1 96 aa14.06□□□□□ -0.16
CDCA4-201ENST00000336219 PLAC8L1A1L4L8 177 aa14.05□□□□□ -0.16
CDCA4-201ENST00000336219 MIR7-3HGQ8N6C7 128 aa14.05□□□□□ -0.16
CDCA4-201ENST00000336219 GAGE2AQ6NT46 116 aa14.05□□□□□ -0.16
CDCA4-201ENST00000336219 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
CDCA4-201ENST00000336219 C9orf129Q5T035 196 aaKnown RBP14.04□□□□□ -0.16
CDCA4-201ENST00000336219 TMEM243Q9BU79 118 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 IGKV2-28A0A075B6P5 120 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 IGKV2D-28P01615 120 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 HERV-K104P63124 156 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 C16orf74Q96GX8 76 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 WFDC10AQ9H1F0 79 aa14.04□□□□□ -0.16
CDCA4-201ENST00000336219 UBE2L6O14933 153 aa14.03□□□□□ -0.16
CDCA4-201ENST00000336219 HIST2H2BCQ6DN03 193 aa14.03□□□□□ -0.16
CDCA4-201ENST00000336219 LINC00643Q86TS7 51 aa14.03□□□□□ -0.16
CDCA4-201ENST00000336219 PLA2G2AP14555 144 aa14.03□□□□□ -0.16
CDCA4-201ENST00000336219 CMC4P56277 68 aaPredicted RBP14.03□□□□□ -0.16
CDCA4-201ENST00000336219 A0A087WYN8 130 aa14.02□□□□□ -0.16
CDCA4-201ENST00000336219 SETXQ7Z333 2677 aaKnown RBP14.02□□□□□ -0.17
CDCA4-201ENST00000336219 JMJD1CQ15652 2540 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 TRGV2A0A075B6R0 118 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 CRPP02741 224 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 MALP21145 153 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 SND1-IT1Q9HBX3 110 aa14.01□□□□□ -0.17
CDCA4-201ENST00000336219 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
CDCA4-201ENST00000336219 COX7B2Q8TF08 81 aa14□□□□□ -0.17
CDCA4-201ENST00000336219 TRBV6-4A0A1B0GX49 114 aa14□□□□□ -0.17
CDCA4-201ENST00000336219 IMUPQ9GZP8 106 aa14□□□□□ -0.17
CDCA4-201ENST00000336219 C19orf73Q9NVV2 129 aa14□□□□□ -0.17
CDCA4-201ENST00000336219 FLNAP21333 2647 aaKnown RBP14□□□□□ -0.17
CDCA4-201ENST00000336219 RPL28P46779 137 aaKnown RBP13.99□□□□□ -0.17
CDCA4-201ENST00000336219 SMIM11BQ8TCY0 68 aa13.99□□□□□ -0.17
CDCA4-201ENST00000336219 FAM110AQ9BQ89 295 aa13.99□□□□□ -0.17
CDCA4-201ENST00000336219 LINC00158P58513 81 aa13.99□□□□□ -0.17
CDCA4-201ENST00000336219 TRAV13-2A0A0B4J235 113 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 IGLV1-51P01701 117 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 ATP5G1P05496 136 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 SDIM1Q6ZPB5 146 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 CSNK1G2-AS1Q8NCQ2 148 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 OVOL2Q9BRP0 275 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 IGLV4-60A0A075B6I1 120 aa13.98□□□□□ -0.17
CDCA4-201ENST00000336219 CCDC168Q8NDH2 2452 aa13.97□□□□□ -0.17
CDCA4-201ENST00000336219 PPDPFQ9H3Y8 114 aa13.97□□□□□ -0.17
CDCA4-201ENST00000336219 FAM222AQ5U5X8 452 aa13.96□□□□□ -0.17
CDCA4-201ENST00000336219 C16orf95Q9H693 158 aa13.96□□□□□ -0.17
CDCA4-201ENST00000336219 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.18
CDCA4-201ENST00000336219 PFN2P35080 140 aa13.96□□□□□ -0.18
CDCA4-201ENST00000336219 C14orf132Q9NPU4 83 aa13.96□□□□□ -0.18
CDCA4-201ENST00000336219 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.18
CDCA4-201ENST00000336219 CCL18P55774 89 aa13.95□□□□□ -0.18
CDCA4-201ENST00000336219 C11orf68Q9H3H3 251 aaKnown RBP13.95□□□□□ -0.18
CDCA4-201ENST00000336219 RNASE1P07998 156 aaKnown RBP13.94□□□□□ -0.18
CDCA4-201ENST00000336219 C9orf153Q5TBE3 101 aa13.94□□□□□ -0.18
CDCA4-201ENST00000336219 INAFM2P0DMQ5 153 aa13.94□□□□□ -0.18
CDCA4-201ENST00000336219 C5orf38Q86SI9 138 aa13.94□□□□□ -0.18
CDCA4-201ENST00000336219 KRTAP1-1Q07627 177 aa13.93□□□□□ -0.18
CDCA4-201ENST00000336219 C3orf22Q8N5N4 141 aa13.93□□□□□ -0.18
CDCA4-201ENST00000336219 DNAL4O96015 105 aa13.92□□□□□ -0.18
CDCA4-201ENST00000336219 PF4P02776 101 aa13.92□□□□□ -0.18
CDCA4-201ENST00000336219 SLPIP03973 132 aa13.92□□□□□ -0.18
CDCA4-201ENST00000336219 FHL2Q14192 279 aa13.92□□□□□ -0.18
CDCA4-201ENST00000336219 KLK5Q9Y337 293 aaPredicted RBP13.92□□□□□ -0.18
CDCA4-201ENST00000336219 TRBV6-8A0A0A6YYG3 113 aa13.92□□□□□ -0.18
CDCA4-201ENST00000336219 LECT2O14960 151 aa13.9□□□□□ -0.18
CDCA4-201ENST00000336219 TMEM126AQ9H061 195 aa13.9□□□□□ -0.18
CDCA4-201ENST00000336219 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
CDCA4-201ENST00000336219 IGKV3D-7A0A0C4DH55 119 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms